Evidence map›Paper›PMID 29233927›Full record

ArticleCancer research2018

Comprehensive Mutation and Copy Number Profiling in Archived Circulating Breast Cancer Tumor Cells Documents Heterogeneous Resistance Mechanisms.

Costanza Paoletti, Andi K Cani, Jose M Larios, Daniel H Hovelson, Kimberly Aung, Elizabeth P Darga, Emily M Cannell, Paul J Baratta, Chia-Jen Liu, David Chu and 17 more

Abstract read
In one paragraph

Article in Cancer research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 63 papers.

0numbers the graph read from it
0cells of the map it votes in
63citing papers in PubMed
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

63 citing papers in PubMed, 105 citations in OpenAlex.

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  11. Tumor biomarkers for diagnosis, prognosis and targeted therapy.Signal transduction and targeted therapy · 2024
    Review
  12. Review
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  14. Circulating tumour cell isolation, analysis and clinical application.Cellular oncology (Dordrecht, Netherlands) · 2023
    Review
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3 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors at 6 institutions in 2 countries.

Costanza Paoletti *Breast Oncology Program of the University of Michigan Comprehensive Cancer Center, Ann Arbor, Michigan.
Andi K Cani *Michigan Center for Translational Pathology, Department of Pathology, University of Michigan, Ann Arbor, Michigan.
Jose M LariosBreast Oncology Program of the University of Michigan Comprehensive Cancer Center, Ann Arbor, Michigan.
Daniel H HovelsonMichigan Center for Translational Pathology, Department of Pathology, University of Michigan, Ann Arbor, Michigan.
Kimberly AungBreast Oncology Program of the University of Michigan Comprehensive Cancer Center, Ann Arbor, Michigan.
Elizabeth P DargaBreast Oncology Program of the University of Michigan Comprehensive Cancer Center, Ann Arbor, Michigan.
Emily M CannellBreast Oncology Program of the University of Michigan Comprehensive Cancer Center, Ann Arbor, Michigan.
Paul J BarattaBreast Oncology Program of the University of Michigan Comprehensive Cancer Center, Ann Arbor, Michigan.
Chia-Jen LiuMichigan Center for Translational Pathology, Department of Pathology, University of Michigan, Ann Arbor, Michigan.
David ChuThe Sidney Kimmel Comprehensive Cancer Center, The Johns Hopkins University School of Medicine Department of Oncology, Baltimore, Maryland.
Maryam YazdaniMenarini Silicon Biosystems, Inc., San Diego, California.
Allen R BlevinsMenarini Silicon Biosystems, Inc., San Diego, California.
Valeria SeroMenarini Silicon Biosystems, Inc., San Diego, California.
Nahomi TokudomeBreast Oncology Program of the University of Michigan Comprehensive Cancer Center, Ann Arbor, Michigan.
Dafydd G ThomasBreast Oncology Program of the University of Michigan Comprehensive Cancer Center, Ann Arbor, Michigan.
Christina GerschBreast Oncology Program of the University of Michigan Comprehensive Cancer Center, Ann Arbor, Michigan.
Anne F SchottBreast Oncology Program of the University of Michigan Comprehensive Cancer Center, Ann Arbor, Michigan.
Yi-Mi WuComphrehensive Cancer Center, University of Michigan, Ann Arbor, Michigan.
Robert LonigroComphrehensive Cancer Center, University of Michigan, Ann Arbor, Michigan.
Dan R RobinsonComphrehensive Cancer Center, University of Michigan, Ann Arbor, Michigan.
Arul M ChinnaiyanComphrehensive Cancer Center, University of Michigan, Ann Arbor, Michigan.
Farideh Z BischoffMenarini Silicon Biosystems, Inc., San Diego, California.
Michael D JohnsonGeorgetown University, Washington, D.C.
Ben H ParkThe Sidney Kimmel Comprehensive Cancer Center, The Johns Hopkins University School of Medicine Department of Oncology, Baltimore, Maryland.
Daniel F HayesBreast Oncology Program of the University of Michigan Comprehensive Cancer Center, Ann Arbor, Michigan.
James M RaeBreast Oncology Program of the University of Michigan Comprehensive Cancer Center, Ann Arbor, Michigan.
Scott A TomlinsComphrehensive Cancer Center, University of Michigan, Ann Arbor, Michigan. tomlinss@med.umich.edu.
Michigan Center for Translational Pathology · USUniversity of Michigan · USSilicon Labs (United States) · USJohns Hopkins University · USGeorgetown University · USWakayama Medical University · JP

Funding

Circulating plasma tumor DNA as a biomarker for early stage breast cancerR01CA194024 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI PARK, BEN HO · 2016 to 2020
$1.9M
Training Program in Translational ResearchT32GM113900 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI LIEBERMAN, ANDREW P, NIKOLOVSKA-COLESKA, ZANETA · 2016 to 2020
$991k
NCI NIH HHS R01 CA194024NIGMS NIH HHS T32 GM113900
6 · The paper itself

Abstract

Addressing drug resistance is a core challenge in cancer research, but the degree of heterogeneity in resistance mechanisms in cancer is unclear. In this study, we conducted next-generation sequencing (NGS) of circulating tumor cells (CTC) from patients with advanced cancer to assess mechanisms of resistance to targeted therapy and reveal opportunities for precision medicine. Comparison of the genomic landscapes of CTCs and tissue metastases is complicated by challenges in comprehensive CTC genomic profiling and paired tissue acquisition, particularly in patients who progress after targeted therapy. Thus, we assessed by NGS somatic mutations and copy number alterations (CNA) in archived CTCs isolated from patients with metastatic breast cancer who were enrolled in concurrent clinical trials that collected and analyzed CTCs and metastatic tissues. In 76 individual and pooled informative CTCs from 12 patients, we observed 85% concordance in at least one or more prioritized somatic mutations and CNA between paired CTCs and tissue metastases. Potentially actionable genomic alterations were identified in tissue but not CTCs, and vice versa. CTC profiling identified diverse intra- and interpatient molecular mechanisms of endocrine therapy resistance, including loss of heterozygosity in individual CTCs. For example, in one patient, we observed CTCs that were either wild type for

Indexed as

Breast NeoplasmsDNA Copy Number VariationsFemaleHumansMutationNeoplastic Cells, Circulating

Identifiers

PMID29233927
PMCPMC5815882
OpenAlexW2775781476

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.