Evidence map›Paper›PMID 29232387›Full record

ArticlePloS one2017

Improved sample treatment protocol for accurate detection of live Salmonella spp. in food samples by viability PCR.

Mai Dinh Thanh, Gemma Agustí, Anneluise Mader, Bernd Appel, Francesc Codony

Abstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Review
  3. An Improved Real-Time Viability PCR Assay to DetectInternational journal of molecular sciences · 2022
    Article
  4. Article
  5. Review
  6. Article
  7. Detection ofFoods (Basel, Switzerland) · 2019
    Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Mai Dinh ThanhFreie Universität Berlin, Department of Biology, Chemistry and Pharmacy, Berlin, Germany.ORCID http://orcid.org/0000-0002-3025-973X
Gemma AgustíGenIUL, Barcelona, Spain.
Anneluise MaderGerman Federal Institute for Risk Assessment, Department Biological Safety, Berlin, Germany.
Bernd AppelGerman Federal Institute for Risk Assessment, Department Biological Safety, Berlin, Germany.
Francesc CodonyGenIUL, Barcelona, Spain.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Culture-based detection is still considered as the standard way for detection of Salmonella in foods, although molecular methods, such as viability PCR (vPCR), have been introduced to overcome some disadvantages of traditional culture methods. Despite the success of the vPCR methodology, the problem of false-positive results is a major drawback, especially when applied to environmental samples, hindering the interpretation of the results. To improve the efficiency of vPCR, many approaches have been introduced by several authors during the last years. In the present work, the combination of PEMAX dye, double tube change, and double photo-activation step was established as a strategy to improve vPCR protocol. By combining these approaches, we developed an improved sample treatment protocol able to neutralize DNA signals of up to 5.0×107 dead cells/sample from both pure culture and artificially contaminated food samples. Our results indicate that vPCR can work reliable and has a potential for high throughput detection of live Salmonella cells in food samples, minimizing false-positive signals.

Indexed as

Food MicrobiologyDNA, BacterialPolymerase Chain ReactionSalmonellaDNA, Bacterial

Identifiers

PMID29232387
PMCPMC5726647

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.