Evidence map›Paper›PMID 29230063›Full record

ArticleScientific reports2017

Multiple gene genealogy reveals high genetic diversity and evidence for multiple origins of Chinese Plasmopara viticola population.

Wei Zhang, Ishara S Manawasinghe, Wensheng Zhao, Jianping Xu, Siraprapa Brooks, Xueyan Zhao, Kevin D Hyde, K W Thilini Chethana, Jianhua Liu, Xinghong Li and 1 more

Abstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Characterization ofFrontiers in plant science · 2026
    Article
  2. Review
  3. Origin and pathogenicity variation ofFrontiers in microbiology · 2024
    Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. High Genetic Diversity and Species Complexity ofFrontiers in microbiology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Wei ZhangBeijing Municipal Key Laboratory for Environmental Friendly Management on Pests of North China Fruits, Institute of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, People's Republic of China.
Ishara S ManawasingheBeijing Municipal Key Laboratory for Environmental Friendly Management on Pests of North China Fruits, Institute of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, People's Republic of China.
Wensheng ZhaoCollege of Plant Protection, China Agricultural University, Beijing, 100193, People's Republic of China.
Jianping XuDepartment of Biology, McMaster University, Hamilton, Ontario, L8S 4K1, Canada.ORCID 0000-0003-2915-2780
Siraprapa BrooksSchool of Science, Mae Fah Luang University, Chiang, Rai, 57100, Thailand.
Xueyan ZhaoBeijing Municipal Key Laboratory for Environmental Friendly Management on Pests of North China Fruits, Institute of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, People's Republic of China.
Kevin D HydeCenter of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand.
K W Thilini ChethanaBeijing Municipal Key Laboratory for Environmental Friendly Management on Pests of North China Fruits, Institute of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, People's Republic of China.
Jianhua LiuBeijing Municipal Key Laboratory for Environmental Friendly Management on Pests of North China Fruits, Institute of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, People's Republic of China.
Xinghong LiBeijing Municipal Key Laboratory for Environmental Friendly Management on Pests of North China Fruits, Institute of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, People's Republic of China. lixinghong1962@163.com.
Jiye YanBeijing Municipal Key Laboratory for Environmental Friendly Management on Pests of North China Fruits, Institute of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, People's Republic of China. jiyeyan@vip.163.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Downy mildew caused by Plasmopara viticola is one of the most devastating diseases of grapevines worldwide. So far, the genetic diversity and origin of the Chinese P. viticola population are unclear. In the present study, 103 P. viticola isolates were sequenced at four gene regions: internal transcribed spacer one (ITS), large subunit of ribosomal RNA (LSU), actin gene (ACT) and beta-tubulin (TUB). The sequences were analyzed to obtain polymorphism and diversity information of the Chinese population as well as to infer the relationships between Chinese and American isolates. High genetic diversity was observed for the Chinese population, with evidence of sub-structuring based on climate. Phylogenetic analysis and haplotype networks showed evidence of close relationships between some American and Chinese isolates, consistent with recent introduction from America to China via planting materials. However, there is also evidence for endemic Chinese P. viticola isolates. Our results suggest that the current Chinese Plasmopara viticola population is an admixture of endemic and introduced isolates.

Indexed as

Genetics, PopulationGenetic VariationGene Expression ProfilingGene Expression Regulation, PlantPeronosporaPhylogenyPlant DiseasesPlant ProteinsVitisPlant Proteins

Identifiers

PMID29230063
PMCPMC5725484

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.