ArticleScientific reports2017
Comparative genome analysis of the vineyard weed endophyte Pseudomonas viridiflava CDRTc14 showing selective herbicidal activity.
Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.
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Who cites it
9 citing papers in PubMed, 34 citations in OpenAlex.
- Characterization of Pseudomonas mediterranea and Pseudomonas viridiflava strains associated with tomato pith necrosis in the Al Taif region, Saudi Arabia.Scientific reports · 2026Article
- Plant microbiome technology for sustainable agriculture.Frontiers in microbiology · 2024Article
- Bacteria associated with Zn-hyperaccumulators Arabidopsis halleri and Arabidopsis arenosa from Zn-Pb-Cd waste heaps in Poland as promising tools for bioremediation.Scientific reports · 2023Article
- Plant-Associated Bacteria as Sources for the Development of Bioherbicides.Plants (Basel, Switzerland) · 2022Review
- Achievements, Developments and Future Challenges in the Field of Bioherbicides for Weed Control: A Global Review.Plants (Basel, Switzerland) · 2022Article
- Application of biostimulant products and biological control agents in sustainable viticulture: A review.Frontiers in plant science · 2022Review
- Pseudomonas viridiflava: An internal outsider of the Pseudomonas syringae species complex.Molecular plant pathology · 2022Article
- A review on the plant microbiome: Ecology, functions, and emerging trends in microbial application.Journal of advanced research · 2019Review
- Defining the Genetic Basis of Plant⁻Endophytic Bacteria Interactions.International journal of molecular sciences · 2019Review
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Authors and funding
5 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Microbes produce a variety of secondary metabolites to be explored for herbicidal activities. We investigated an endophyte Pseudomonas viridiflava CDRTc14, which impacted growth of its host Lepidium draba L., to better understand the possible genetic determinants for herbicidal and host-interaction traits. Inoculation tests with a variety of target plants revealed that CDRTc14 shows plant-specific effects ranging from beneficial to negative. Its herbicidal effect appeared to be dose-dependent and resembled phenotypically the germination arrest factor of Pseudomonas fluorescens WH6. CDRTc14 shares 183 genes with the herbicidal strain WH6 but the formylaminooxyvinylglycine (FVG) biosynthetic genes responsible for germination arrest of WH6 was not detected. CDRTc14 showed phosphate solubilizing ability, indole acetic acid and siderophores production in vitro and harbors genes for these functions. Moreover, genes for quorum sensing, hydrogen cyanide and ACC deaminase production were also found in this strain. Although, CDRTc14 is related to plant pathogens, we neither found a complete pathogenicity island in the genome, nor pathogenicity symptoms on susceptible plant species upon CDRTc14 inoculation. Comparison with other related genomes showed several unique genes involved in abiotic stress tolerance in CDRTc14 like genes responsible for heavy metal and herbicide resistance indicating recent adaptation to plant protection measures applied in vineyards.
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