Evidence map›Paper›PMID 29229840›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2017

Structural changes of tailless bacteriophage ΦX174 during penetration of bacterial cell walls.

Yingyuan Sun, Aaron P Roznowski, Joshua M Tokuda, Thomas Klose, Alexander Mauney, Lois Pollack, Bentley A Fane, Michael G Rossmann

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 51 citations in OpenAlex.

  1. Article
  2. Article
  3. ΦX174 bacteriophage viability predicted by protein biophysical modeling.bioRxiv : the preprint server for biology · 2025
    Article
  4. Article
  5. Article
  6. Viral Genome Delivery Across Bacterial Cell Surfaces.Annual review of microbiology · 2024
    Review
  7. Review
  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Phenolic compounds of Phellinus spp. with antibacterial and antiviral activities.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2022
    Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Yingyuan SunDepartment of Biological Sciences, Purdue University, West Lafayette, IN 47907.
Aaron P RoznowskiThe BIO5 Institute, University of Arizona, Tucson, AZ 85721.
Joshua M TokudaSchool of Applied and Engineering Physics, Cornell University, Ithaca, NY 14853.
Thomas KloseDepartment of Biological Sciences, Purdue University, West Lafayette, IN 47907.ORCID 0000-0002-2150-9792
Alexander MauneySchool of Applied and Engineering Physics, Cornell University, Ithaca, NY 14853.
Lois PollackSchool of Applied and Engineering Physics, Cornell University, Ithaca, NY 14853.
Bentley A FaneThe BIO5 Institute, University of Arizona, Tucson, AZ 85721.
Michael G RossmannDepartment of Biological Sciences, Purdue University, West Lafayette, IN 47907; mr@purdue.edu.
Cornell University · USPurdue University West Lafayette · USUniversity of Arizona · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Unlike tailed bacteriophages, which use a preformed tail for transporting their genomes into a host bacterium, the ssDNA bacteriophage ΦX174 is tailless. Using cryo-electron microscopy and time-resolved small-angle X-ray scattering, we show that lipopolysaccharides (LPS) form bilayers that interact with ΦX174 at an icosahedral fivefold vertex and induce single-stranded (ss) DNA genome ejection. The structures of ΦX174 complexed with LPS have been determined for the pre- and post-ssDNA ejection states. The ejection is initiated by the loss of the G protein spike that encounters the LPS, followed by conformational changes of two polypeptide loops on the major capsid F proteins. One of these loops mediates viral attachment, and the other participates in making the fivefold channel at the vertex contacting the LPS.

Indexed as

Bacteriophage phi X 174Capsid ProteinsVirus InternalizationCell WallEscherichia coliLipopolysaccharidesCapsid ProteinsLipopolysaccharidesbacteriophagecryo-EMDNA ejectionlipopolysaccharideΦX174

Identifiers

PMID29229840
PMCPMC5748221
OpenAlexW2772134682

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.