Evidence map›Paper›PMID 29228567›Full record

ArticleOncotarget2017

Biomarker significance of plasma and tumor miR-21, miR-221, and miR-106a in osteosarcoma.

Manjula Nakka, Wendy Allen-Rhoades, Yiting Li, Aaron J Kelly, Jianhe Shen, Aaron M Taylor, Donald A Barkauskas, Jason T Yustein, Irene L Andrulis, Jay S Wunder and 5 more

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 1 pooled it
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 1 synthesis or guideline pooled it, 51 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Review
  6. Review
  7. Overview of miR-106a Regulatory Roles: from Cancer to Aging.Bioengineering (Basel, Switzerland) · 2023
    Review
  8. Article
  9. Review
  10. Article
  11. Pathway Analysis for Cancer Research and Precision Oncology Applications.Advances in experimental medicine and biology · 2022
    Article
  12. Article
  13. Review
  14. Article
  15. Review
  16. Review
  17. Review
  18. Article
  19. Article
  20. miRNA signatures in childhood sarcomas and their clinical implications.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 7 institutions in 2 countries.

Manjula NakkaTexas Children's Cancer and Hematology Centers, Texas Children's Hospital, Houston, TX, USA.
Wendy Allen-RhoadesTexas Children's Cancer and Hematology Centers, Texas Children's Hospital, Houston, TX, USA.
Yiting LiTexas Children's Cancer and Hematology Centers, Texas Children's Hospital, Houston, TX, USA.
Aaron J KellyDepartment of Pediatrics, and Baylor College of Medicine, Houston, TX, USA.
Jianhe ShenTexas Children's Cancer and Hematology Centers, Texas Children's Hospital, Houston, TX, USA.
Aaron M TaylorDepartment of Pediatrics, and Baylor College of Medicine, Houston, TX, USA.
Donald A BarkauskasDepartment of Preventive Medicine, Keck School of Medicine, University of Southern California, Los Angeles, CA, USA.
Jason T YusteinTexas Children's Cancer and Hematology Centers, Texas Children's Hospital, Houston, TX, USA.
Irene L AndrulisLunenfeld-Tanenbaum Research Institute, Sinai Health System, Toronto, ON, Canada.
Jay S WunderDepartment of Surgery, University of Toronto, Toronto, ON, Canada.
Richard GorlickChildren's Oncology Group, Monrovia, CA, USA.
Paul S MeltzerGenetics Branch, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.
Ching C LauTexas Children's Cancer and Hematology Centers, Texas Children's Hospital, Houston, TX, USA.
Tsz-Kwong ManTexas Children's Cancer and Hematology Centers, Texas Children's Hospital, Houston, TX, USA.
TARGET osteosarcoma consortium
Baylor College of Medicine · USTexas Children's Hospital · USChildren's Cancer Center · USChildren's Oncology Group · USNational Institutes of Health · USSinai Health System · CAUniversity of Toronto · CA

Funding

NCTN BIQSFP ANBL1531 (NRT)U10CA180886 · NCI · PUBLIC HEALTH INSTITUTE · PI Douglas S. Hawkins · 2014 to 2026
$390.6M
COG SDMC - Statistics CoreU10CA180899 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI TODD A ALONZO · 2014 to 2026
$132.8M
Characterization of the Osteosarcoma GenomeZIABC011328 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI MELTZER, PAUL S. · 2010 to 2025
$28.0M
PEDIATRIC ONCOLOGY CLINICAL RESEARCH TRAINING PROGRAMK12CA090433 · NCI · BAYLOR COLLEGE OF MEDICINE · PI CARL E ALLEN, Donald W. Parsons · 2002 to 2026
$18.5M
Initiative for Maximizing Student Development (IMSD) ProgramR25GM056929 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI PEREIRA, FRED A · 1998 to 2023
$12.4M
Harnessing p27 for Prognostication of Pediatric OsteosarcomaR01HD074553 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI MAN, TSZ-KWONG · 2013 to 2015
$834k
NCI NIH HHS K12 CA090433NCI NIH HHS U10 CA180886NCI NIH HHS U10 CA180899NICHD NIH HHS R01 HD074553NIGMS NIH HHS R25 GM056929
6 · The paper itself

Abstract

Osteosarcoma is the most common malignant bone tumor in children and young adults. Despite the use of surgery and multi-agent chemotherapy, osteosarcoma patients who have a poor response to chemotherapy or develop relapses have a dismal outcome. Identification of biomarkers for active disease may help to monitor tumor burden, detect early relapses, and predict prognosis in these patients. In this study, we examined whether circulating miRNAs can be used as biomarkers in osteosarcoma patients. We performed genome-wide miRNA profiling on a discovery cohort of osteosarcoma and control plasma samples. A total of 56 miRNAs were upregulated and 164 miRNAs were downregulated in osteosarcoma samples when compared to control plasma samples. miR-21, miR-221 and miR-106a were selected for further validation based on their known biological importance. We showed that all three circulating miRNAs were expressed significantly higher in osteosarcoma samples than normal samples in an independent cohort obtained from the Children's Oncology Group. Furthermore, we demonstrated that miR-21 was expressed significantly higher in osteosarcoma tumors compared with normal bone controls. More importantly, lower expressions of miR-21 and miR-221, but not miR-106a, significantly correlated with a poor outcome. In conclusion, our results indicate that miR-21, miR-221 and miR-106a were elevated in the circulation of osteosarcoma patients, whereas tumor expressions of miR-21 and miR-221 are prognostically significant. Further investigation of these miRNAs may lead to a better prognostic method and potential miRNA therapeutics for osteosarcoma.

Indexed as

biomarkermiRNAosteosarcomaplasmaprognosis

Identifiers

PMID29228567
PMCPMC5722519
OpenAlexW2618466351

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.