Evidence map›Paper›PMID 29226671›Full record

ArticleAnalytical chemistry2018

A Multifunctional Reactor with Dry-Stored Reagents for Enzymatic Amplification of Nucleic Acids.

Jinzhao Song, Changchun Liu, Michael G Mauk, Jing Peng, Thomas Schoenfeld, Haim H Bau

Abstract read
In one paragraph

Article in Analytical chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 45 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Palm-Sized Lab-In-A-Magnetofluidic Tube Platform for Rapid and Sensitive Virus Detection.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Article
  5. Review
  6. Review
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Article
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Jinzhao SongDepartment of Mechanical Engineering and Applied Mechanics, School of Engineering and Applied Science, University of Pennsylvania , Philadelphia, Pennsylvania 19104, United States.ORCID 0000-0002-2097-8685
Changchun LiuDepartment of Mechanical Engineering and Applied Mechanics, School of Engineering and Applied Science, University of Pennsylvania , Philadelphia, Pennsylvania 19104, United States.
Michael G MaukDepartment of Mechanical Engineering and Applied Mechanics, School of Engineering and Applied Science, University of Pennsylvania , Philadelphia, Pennsylvania 19104, United States.
Jing PengDepartment of Mechanical Engineering and Applied Mechanics, School of Engineering and Applied Science, University of Pennsylvania , Philadelphia, Pennsylvania 19104, United States.
Thomas SchoenfeldLucigen Corporation, Middleton, Wisconsin 53562, United States.
Haim H BauDepartment of Mechanical Engineering and Applied Mechanics, School of Engineering and Applied Science, University of Pennsylvania , Philadelphia, Pennsylvania 19104, United States.
University of Pennsylvania · USLucigen Corporation · US

Funding

Point of Care Diagnostics of HPV-Associated Cervical Cancer in HIV Epidemic Areas in ChinaR01CA214072 · NCI · UNIVERSITY OF PENNSYLVANIA · PI LIU, CHANGCHUN · 2017 to 2021
$771k
Multiplexed point-of-care molecular detection for multiple infections in co-endemic settingsR21AI128059 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI BAU, HAIM H, GREENBERG, ROBERT M · 2017 to 2018
$443k
Molecular and Antibody Detection of Zika Virus in Saliva at the Point of CareR21DE026700 · NIDCR · UNIVERSITY OF PENNSYLVANIA · PI BAU, HAIM H · 2016 to 2017
$443k
A Microfluidic System for POC Molecular Diagnosis of HPV in Oral FluidsR43DE025466 · NIDCR · LUCIGEN CORPORATION · PI MANNA, DIPANKAR · 2015 to 2015
$225k
NCI NIH HHS R01 CA214072NIAID NIH HHS R21 AI128059NIDCR NIH HHS R21 DE026700NIDCR NIH HHS R43 DE025466
6 · The paper itself

Abstract

To enable inexpensive molecular detection at the point-of-care and at home with minimal or no instrumentation, it is necessary to streamline unit operations and store reagents refrigeration-free. To address this need, a multifunctional enzymatic amplification reactor that combines solid-phase nucleic acid extraction, concentration, and purification; refrigeration-free storage of reagents with just-in-time release; and enzymatic amplification is designed, prototyped, and tested. A nucleic acid isolation membrane is placed at the reactor's inlet, and paraffin-encapsulated reagents are prestored within the reactor. When a sample mixed with chaotropic agents is filtered through the nucleic acid isolation membrane, the membrane binds nucleic acids from the sample. Importantly, the sample volume is decoupled from the reaction volume, enabling the use of relatively large sample volumes for high sensitivity. When the amplification reactor's temperature increases to its operating level, the paraffin encapsulating the reagents melts and moves out of the way. The reagents are hydrated, just-in-time, and the polymerase reaction proceeds. The amplification process can be monitored, in real-time. We demonstrate our reactors' ability to amplify both DNA and RNA targets using polymerase with both reverse-transcriptase and strand displacement activities to obtain sensitivities on-par with benchtop equipment and a shelf life exceeding 6 months.

Indexed as

DNA, ViralEquipment DesignFreeze DryingHuman papillomavirus 16HumansIndicators and ReagentsMicrofluidic Analytical TechniquesNucleic AcidsPapillomavirus InfectionsPoint-of-Care SystemsPolymerase Chain ReactionSolid Phase ExtractionDNA, ViralIndicators and ReagentsNucleic Acids

Identifiers

PMID29226671
PMCPMC6310013
OpenAlexW2774413025

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.