Evidence map›Paper›PMID 29225592›Full record

ArticleFrontiers in microbiology2017

Bacterial Succession on Sinking Particles in the Ocean's Interior.

Erik A Pelve, Kristina M Fontanez, Edward F DeLong

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 70 citations in OpenAlex.

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  8. Rapid formation of bioaggregates and morphology transition to biofilm streamers induced by pore-throat flows.Proceedings of the National Academy of Sciences of the United States of America · 2023
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  11. Microorganisms · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 2 countries.

Erik A PelveDepartment of Cell and Molecular Biology-Molecular Evolution, Biomedical Center, Uppsala University, Uppsala, Sweden.
Kristina M FontanezDepartment of Civil and Environmental Engineering, Massachusetts Institute of Technology, Cambridge, MA, United States.
Edward F DeLongDaniel K. Inoue Center for Microbial Oceanograpy: Research and Education, Department of Oceanography, University of Hawaii at Manoa, Honolulu, HI, United States.
Massachusetts Institute of Technology · USUniversity of Hawaiʻi at Mānoa · USUppsala University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sinking particles formed in the photic zone and moving vertically through the water column are a main mechanism for nutrient transport to the deep ocean, and a key component of the biological carbon pump. The particles appear to be processed by a microbial community substantially different from the surrounding waters. Single cell genomics and metagenomics were employed to describe the succession of dominant bacterial groups during particle processing. Sinking particles were extracted from sediment traps at Station Aloha in the North Pacific Subtropical Gyre (NPSG) during two different trap deployments conducted in July and August 2012. The microbial communities in poisoned vs. live sediment traps differed significantly from one another, consistent with prior observations by Fontanez et al. (2015). Partial genomes from these communities were sequenced from cells belonging to the genus

Indexed as

biological pumpmarine bacteriamarine particlesmetagenomicsoligotrophic gyresediment trapsingle cell genomics

Identifiers

PMID29225592
PMCPMC5706468
OpenAlexW2766352312

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.