Evidence map›Paper›PMID 29222330›Full record

ArticleThe Journal of biological chemistry2018

Discovery of stimulator binding to a conserved pocket in the heme domain of soluble guanylyl cyclase.

Jessica A Wales, Cheng-Yu Chen, Linda Breci, Andrzej Weichsel, Sylvie G Bernier, James E Sheppeck, Robert Solinga, Takashi Nakai, Paul A Renhowe, Joon Jung and 1 more

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. Soluble Guanylate Cyclase Stimulators and Activators.Handbook of experimental pharmacology · 2021
    Article
  10. Review
  11. Review
  12. Review
  13. Review
  14. Article
  15. Article
  16. Article
  17. Review
  18. MetaUniDec: High-Throughput Deconvolution of Native Mass Spectra.Journal of the American Society for Mass Spectrometry · 2019
    Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Jessica A WalesFrom the Department of Chemistry and Biochemistry, University of Arizona, Tucson, Arizona 85721 and.
Cheng-Yu ChenFrom the Department of Chemistry and Biochemistry, University of Arizona, Tucson, Arizona 85721 and.
Linda BreciFrom the Department of Chemistry and Biochemistry, University of Arizona, Tucson, Arizona 85721 and.
Andrzej WeichselFrom the Department of Chemistry and Biochemistry, University of Arizona, Tucson, Arizona 85721 and.
Sylvie G BernierIronwood Pharmaceuticals, Cambridge, Massachusetts 02142.
James E SheppeckIronwood Pharmaceuticals, Cambridge, Massachusetts 02142.
Robert SolingaIronwood Pharmaceuticals, Cambridge, Massachusetts 02142.
Takashi NakaiIronwood Pharmaceuticals, Cambridge, Massachusetts 02142.
Paul A RenhoweIronwood Pharmaceuticals, Cambridge, Massachusetts 02142.
Joon JungIronwood Pharmaceuticals, Cambridge, Massachusetts 02142.
William R MontfortFrom the Department of Chemistry and Biochemistry, University of Arizona, Tucson, Arizona 85721 and montfort@email.arizona.edu.

Funding

VITAMIN AP30CA023074 · NCI · UNIVERSITY OF ARIZONA · PI Teri L Bankhead · 1985 to 2026
$110.2M
SOUTHWEST ENVIRONMENTAL HEALTH SCIENCES CENTERP30ES006694 · NIEHS · UNIVERSITY OF ARIZONA · PI DEAN BILLHEIMER · 1994 to 2026
$36.7M
WATER DISTRIB:PHYSICAL PROPERT:PIZZA &LMPS MOZZARELLA CHEESES:EARLY STAGE MATURP41RR002301 · NCRR · UNIVERSITY OF WISCONSIN-MADISON · PI MARKLEY, JOHN LUTE · 1985 to 2011
$13.0M
PHYSIOLOGYT32HL007249 · NHLBI · UNIVERSITY OF ARIZONA · PI Brett A Colson, JOHN P KONHILAS · 1985 to 2026
$12.5M
TR&D 3: TECHNOLOGY DEVELOPMENT FOR NMR STUDIES OF SMALL MOLECULES (METABOLOMICS, NATURAL PRODUCTS, METABOLITE-PROTEIN INTERACTIONS) pp.537-585 P41GM103399 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI BUTCHER, SAMUEL E · 2012 to 2019
$9.4M
CHEMISTRY-BIOLOGY INTERFACE TRAINING PROGRAMT32GM008804 · NIGMS · UNIVERSITY OF ARIZONA · PI MONTFORT, WILLIAM R. · 2003 to 2023
$3.9M
Integrated state-of-the-art LC-MS/NMR system for the University of WisconsinS10RR025062 · NCRR · UNIVERSITY OF WISCONSIN-MADISON · PI MARKLEY, JOHN LUTE · 2008 to 2008
$1.7M
Nitric Oxide Signaling in Health and DiseaseR01GM117357 · NIGMS · UNIVERSITY OF ARIZONA · PI MONTFORT, WILLIAM R. · 2015 to 2018
$1.4M
Acquisition of a LTQ Orbitrap XL ETD Hybrid FT Mass SpectrometerS10RR028868 · NCRR · UNIVERSITY OF ARIZONA · PI TSAPRAILIS, GEORGE · 2010 to 2010
$916k
Upgrade of the NMRFAM 750 MHz NMR SpectrometerS10RR029220 · NCRR · UNIVERSITY OF WISCONSIN-MADISON · PI MARKLEY, JOHN LUTE · 2010 to 2010
$766k
NMR Spectrometer System Optimized for Direct 13C or 15N DetectionS10RR023438 · NCRR · UNIVERSITY OF WISCONSIN-MADISON · PI MARKLEY, JOHN LUTE · 2008 to 2008
$500k
CONSOLE UPGRADES FOR NMR FACILITYS10RR008438 · NCRR · UNIVERSITY OF WISCONSIN MADISON · PI MARKLEY, JOHN L · 1993 to 1993
–
NCI NIH HHS P30 CA023074NCRR NIH HHS P41 RR002301NCRR NIH HHS S10 RR002781NCRR NIH HHS S10 RR008438NCRR NIH HHS S10 RR023438NCRR NIH HHS S10 RR025062NCRR NIH HHS S10 RR028868NCRR NIH HHS S10 RR029220NHLBI NIH HHS T32 HL007249NIEHS NIH HHS P30 ES006694NIGMS NIH HHS P41 GM103399NIGMS NIH HHS R01 GM117357NIGMS NIH HHS T32 GM008804
6 · The paper itself

Abstract

Soluble guanylyl cyclase (sGC) is the receptor for nitric oxide and a highly sought-after therapeutic target for the management of cardiovascular diseases. New compounds that stimulate sGC show clinical promise, but where these stimulator compounds bind and how they function remains unknown. Here, using a photolyzable diazirine derivative of a novel stimulator compound, IWP-051, and MS analysis, we localized drug binding to the β1 heme domain of sGC proteins from the hawkmoth

Indexed as

Mutation, MissenseAmino Acid SubstitutionBacteriaBacterial ProteinsBinding SitesHemeNuclear Magnetic Resonance, BiomolecularProtein DomainsSoluble Guanylyl CyclaseBacterial ProteinsHemeSoluble Guanylyl Cyclaseguanylate cyclase (guanylyl cyclase)mass spectrometry (MS)nitric oxidenuclear magnetic resonance (NMR)photoaffinity labelingprotein–drug interaction

Identifiers

PMID29222330
PMCPMC5798312

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.