Evidence map›Paper›PMID 29222192›Full record

ArticlePlant physiology2018

SUPPRESSOR OF GAMMA RESPONSE1 Links DNA Damage Response to Organ Regeneration.

Ross A Johnson, Phillip A Conklin, Michelle Tjahjadi, Victor Missirian, Ted Toal, Siobhan M Brady, Anne B Britt

Abstract read
In one paragraph

Article in Plant physiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Seed longevity and genome damage.Bioscience reports · 2024
    Review
  8. Article
  9. Article
  10. Parallel repair mechanisms in plants and animals.Disease models & mechanisms · 2023
    Article
  11. Article
  12. Seed DNA damage responses promote germination and growth inProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. The quiescent center and root regeneration.Journal of experimental botany · 2021
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Ross A JohnsonDepartment of Plant Biology, University of California Davis, 1 Shields Avenue, Davis, California 95616.ORCID 0000-0002-0024-6700
Phillip A ConklinDepartment of Plant Biology, University of California Davis, 1 Shields Avenue, Davis, California 95616.ORCID 0000-0003-2159-4912
Michelle TjahjadiDepartment of Plant Biology, University of California Davis, 1 Shields Avenue, Davis, California 95616.
Victor MissirianDepartment of Plant Biology, University of California Davis, 1 Shields Avenue, Davis, California 95616.
Ted ToalDepartment of Plant Biology, University of California Davis, 1 Shields Avenue, Davis, California 95616.ORCID 0000-0002-0967-4998
Siobhan M BradyDepartment of Plant Biology, University of California Davis, 1 Shields Avenue, Davis, California 95616.ORCID 0000-0001-9424-8055
Anne B BrittDepartment of Plant Biology, University of California Davis, 1 Shields Avenue, Davis, California 95616 abbritt@ucdavis.edu.ORCID 0000-0003-2244-1790

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In Arabidopsis, DNA damage-induced programmed cell death is limited to the meristematic stem cell niche and its early descendants. The significance of this cell-type-specific programmed cell death is unclear. Here, we demonstrate in roots that it is the programmed destruction of the mitotically compromised stem cell niche that triggers its regeneration, enabling growth recovery. In contrast to wild-type plants,

Indexed as

DNA DamageApoptosisArabidopsisArabidopsis ProteinsCell DivisionGamma RaysMeristemRegenerationSeedsStem Cell NicheTranscription FactorsArabidopsis ProteinsSOG1 protein, ArabidopsisTranscription Factors

Identifiers

PMID29222192
PMCPMC5813563

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.