Evidence map›Paper›PMID 29220439›Full record

ArticleDatabase : the journal of biological databases and curation2017

Text mining and expert curation to develop a database on psychiatric diseases and their genes.

Alba Gutiérrez-Sacristán, Àlex Bravo, Marta Portero-Tresserra, Olga Valverde, Antonio Armario, M C Blanco-Gandía, Adriana Farré, Lierni Fernández-Ibarrondo, Francina Fonseca, Jesús Giraldo and 14 more

Abstract read
In one paragraph

Article in Database : the journal of biological databases and curation, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Constructing knowledge graphs and their biomedical applications.Computational and structural biotechnology journal · 2020
    Review
  8. PDZ Domains as Drug Targets.Advanced therapeutics · 2019
    Review
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors.

Alba Gutiérrez-SacristánResearch Group on Integrative Biomedical Informatics (GRIB), Institut Hospital del Mar d'Investigacions Mèdiques (IMIM), DCEXS, Universitat Pompeu Fabra (UPF), C/Dr. Aiguader 88, Barcelona 08003, Spain.
Àlex BravoResearch Group on Integrative Biomedical Informatics (GRIB), Institut Hospital del Mar d'Investigacions Mèdiques (IMIM), DCEXS, Universitat Pompeu Fabra (UPF), C/Dr. Aiguader 88, Barcelona 08003, Spain.
Marta Portero-TresserraNeurobiology of Behaviour Research Group (GReNeC), Institut Hospital del Mar d'Investigacions Mèdiques (IMIM), DCEXS, Universitat Pompeu Fabra (UPF), Barcelona, Spain.
Olga ValverdeNeurobiology of Behaviour Research Group (GReNeC), Institut Hospital del Mar d'Investigacions Mèdiques (IMIM), DCEXS, Universitat Pompeu Fabra (UPF), Barcelona, Spain.
Antonio ArmarioInstitut de Neurociències and Animal Physiology Unit, Universitat Autònoma de Barcelona (UAB), Barcelona, Spain.
M C Blanco-GandíaDepartment of Psychobiology, Facultad de Psicología, Universitat de València, València, Spain.
Adriana FarréInstitute of Neuropsychiatry and Addiction, Institut Hospital del Mar d'Investigacions Mèdiques (IMIM), Parc de Salut Mar, Universitat Autònoma de Barcelona (UAB), Bellaterra, Spain.
Lierni Fernández-IbarrondoPrograma de Cáncer (IMIM), Investigación Traslacional en Neoplasias Colorrectales, C/Dr. Aiguader 88, Barcelona, Spain.
Francina FonsecaInstitute of Neuropsychiatry and Addiction, Institut Hospital del Mar d'Investigacions Mèdiques (IMIM), Parc de Salut Mar, Universitat Autònoma de Barcelona (UAB), Bellaterra, Spain.
Jesús GiraldoNetwork Biomedical Research Center on Mental Health (CIBERSAM).
Angela LeisResearch Group on Integrative Biomedical Informatics (GRIB), Institut Hospital del Mar d'Investigacions Mèdiques (IMIM), DCEXS, Universitat Pompeu Fabra (UPF), C/Dr. Aiguader 88, Barcelona 08003, Spain.
Anna ManéNetwork Biomedical Research Center on Mental Health (CIBERSAM).
M A MayerResearch Group on Integrative Biomedical Informatics (GRIB), Institut Hospital del Mar d'Investigacions Mèdiques (IMIM), DCEXS, Universitat Pompeu Fabra (UPF), C/Dr. Aiguader 88, Barcelona 08003, Spain.
Sandra Montagud-RomeroDepartment of Psychobiology, Facultad de Psicología, Universitat de València, València, Spain.
Roser NadalNetwork Biomedical Research Center on Mental Health (CIBERSAM).
Jordi OrtizNetwork Biomedical Research Center on Mental Health (CIBERSAM).
Francisco Javier PavonUnidad de Gestión Clínica de Salud Mental, Instituto de Investigación Biomédica de Málaga (IBIMA), Hospital Regional Universitario de Málaga, Málaga, Spain.
Ezequiel Jesús PerezInstitute of Neuropsychiatry and Addiction, Institut Hospital del Mar d'Investigacions Mèdiques (IMIM), Parc de Salut Mar, Universitat Autònoma de Barcelona (UAB), Bellaterra, Spain.
Marta Rodríguez-AriasDepartment of Psychobiology, Facultad de Psicología, Universitat de València, València, Spain.
Antonia SerranoUnidad de Gestión Clínica de Salud Mental, Instituto de Investigación Biomédica de Málaga (IBIMA), Hospital Regional Universitario de Málaga, Málaga, Spain.
Marta TorrensInstitute of Neuropsychiatry and Addiction, Institut Hospital del Mar d'Investigacions Mèdiques (IMIM), Parc de Salut Mar, Universitat Autònoma de Barcelona (UAB), Bellaterra, Spain.
Vincent WarnaultNeurobiology of Behaviour Research Group (GReNeC), Institut Hospital del Mar d'Investigacions Mèdiques (IMIM), DCEXS, Universitat Pompeu Fabra (UPF), Barcelona, Spain.
Ferran SanzResearch Group on Integrative Biomedical Informatics (GRIB), Institut Hospital del Mar d'Investigacions Mèdiques (IMIM), DCEXS, Universitat Pompeu Fabra (UPF), C/Dr. Aiguader 88, Barcelona 08003, Spain.
Laura I FurlongResearch Group on Integrative Biomedical Informatics (GRIB), Institut Hospital del Mar d'Investigacions Mèdiques (IMIM), DCEXS, Universitat Pompeu Fabra (UPF), C/Dr. Aiguader 88, Barcelona 08003, Spain.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Database URL: http://www.psygenet.org. PsyGeNET corpus: http://www.psygenet.org/ds/PsyGeNET/results/psygenetCorpus.tar.

Indexed as

Databases, GeneticSoftwareData CurationData MiningHumansMental Disorders

Identifiers

PMID29220439
PMCPMC5502359

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.