Evidence map›Paper›PMID 29220381›Full record

ArticlePloS one2017

Temporal distribution and genetic variants in influenza A(H1N1)pdm09 virus circulating in Mexico, seasons 2012 and 2013.

Jose Reyes Canche-Pech, Laura Conde-Ferraez, Marylin Puerto-Solis, Refugio Gonzalez-Losa, Pilar Granja-Pérez, Salha Villanueva-Jorge, Maria Chan-Gasca, Jesus Gómez-Carballo, Luisa López-Ochoa, Bertha Jiménez-Delgadillo and 3 more

Abstract readHistorical Article
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Jose Reyes Canche-PechUniversidad Autonoma de Yucatan. Centro de Investigaciones Regionales Dr.Hideyo Noguchi. Av. Centro. C.P. Merida, Yucatan, Mexico.
Laura Conde-FerraezUniversidad Autonoma de Yucatan. Centro de Investigaciones Regionales Dr.Hideyo Noguchi. Av. Centro. C.P. Merida, Yucatan, Mexico.
Marylin Puerto-SolisUniversidad Autonoma de Yucatan. Centro de Investigaciones Regionales Dr.Hideyo Noguchi. Av. Centro. C.P. Merida, Yucatan, Mexico.
Refugio Gonzalez-LosaUniversidad Autonoma de Yucatan. Centro de Investigaciones Regionales Dr.Hideyo Noguchi. Av. Centro. C.P. Merida, Yucatan, Mexico.
Pilar Granja-PérezLaboratorio Estatal de Salud Publica. Servicios de Salud de Yucatan, Yucatan, México.
Salha Villanueva-JorgeLaboratorio Estatal de Salud Publica. Servicios de Salud de Yucatan, Yucatan, México.
Maria Chan-GascaLaboratorio Estatal de Salud Publica. Servicios de Salud de Yucatan, Yucatan, México.
Jesus Gómez-CarballoUniversidad Autonoma de Yucatan. Centro de Investigaciones Regionales Dr.Hideyo Noguchi. Av. Centro. C.P. Merida, Yucatan, Mexico.
Luisa López-OchoaUnidad de Bioquimica y Biologia Molecular de Plantas, Centro de Investigacion Cientifica de Yucatan, A.C., Calle, Col. Chuburna de Hidalgo, C.P. Merida, Yucatan, Mexico.
Bertha Jiménez-DelgadilloUniversidad Autonoma de Yucatan. Facultad de Medicina. Av. Centro. C.P. Merida, Yucatan, Mexico.
Iram Rodríguez-SánchezDepartamento de Genética, Facultad de Medicina, Universidad Autonoma de Nuevo Leon. Av. Gonzalitos s/n cruce con Av. Madero. Col. Mitras Centro. C.P. Monterrey, Nuevo Leon, Mexico.
Jorge Ramírez-PradoUnidad de Biotecnologia, Centro de. Merida, Yucatan, Mexico.
Guadalupe Ayora-TalaveraUniversidad Autonoma de Yucatan. Centro de Investigaciones Regionales Dr.Hideyo Noguchi. Av. Centro. C.P. Merida, Yucatan, Mexico.ORCID http://orcid.org/0000-0002-2829-6945

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The 2012 and 2013 annual influenza epidemics in Mexico were characterized by presenting different seasonal patterns. In 2012 the A(H1N1)pdm09 virus caused a high incidence of influenza infections after a two-year period of low circulation; whereas the 2013 epidemic presented circulation of the A(H1N1)pdm09 virus throughout the year. We have characterized the molecular composition of the Hemagglutinin (HA) and Neuraminidase (NA) genes of the A(H1N1)pdm09 virus from both epidemic seasons, emphasizing the genetic characteristics of viruses isolated from Yucatan in Southern Mexico. The molecular analysis of viruses from the 2012 revealed that all viruses from Mexico were predominantly grouped in clade 7. Strikingly, the molecular characterization of viruses from 2013 revealed that viruses circulating in Yucatan were genetically different to viruses from other regions of Mexico. In fact, we identified the occurrence of two genetic variants containing relevant mutations at both the HA and NA surface antigens. There was a difference on the temporal circulation of each genetic variant, viruses containing the mutations HA-A141T / NA-N341S were detected in May, June and July; whereas viruses containing the mutations HA-S162I / NA-L206S circulated in August and September. We discuss the significance of these novel genetic changes.

Indexed as

Genetic VariationSeasonsGenes, ViralHistory, 21st CenturyHumansInfluenza A Virus, H1N1 SubtypeInfluenza, HumanMexico

Identifiers

PMID29220381
PMCPMC5722308

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.