Evidence map›Paper›PMID 29220379›Full record

ArticlePloS one2017

Zebrafish skeleton development: High resolution micro-CT and FIB-SEM block surface serial imaging for phenotype identification.

Jeremie Silvent, Anat Akiva, Vlad Brumfeld, Natalie Reznikov, Katya Rechav, Karina Yaniv, Lia Addadi, Steve Weiner

Abstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Transcriptomic Profiling of Zebrafish Mutant forInternational journal of molecular sciences · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Jeremie SilventDepartment of Structural Biology, Weizmann Institute of Science, Rehovot, Israel.
Anat AkivaDepartment of Structural Biology, Weizmann Institute of Science, Rehovot, Israel.
Vlad BrumfeldDepartment of Chemical Research Support, Weizmann Institute of Science, Rehovot, Israel.
Natalie ReznikovDepartment of Materials, Institute of Biomedical Engineering, Imperial College London, London, United Kingdom.
Katya RechavDepartment of Chemical Research Support, Weizmann Institute of Science, Rehovot, Israel.
Karina YanivDepartment of Biological Regulation, Weizmann Institute of Science, Rehovot, Israel.
Lia AddadiDepartment of Structural Biology, Weizmann Institute of Science, Rehovot, Israel.
Steve WeinerDepartment of Structural Biology, Weizmann Institute of Science, Rehovot, Israel.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although bone is one of the most studied living materials, many questions about the manner in which bones form remain unresolved, including fine details of the skeletal structure during development. In this study, we monitored skeleton development of zebrafish larvae, using calcein fluorescence, high-resolution micro-CT 3D images and FIB-SEM in the block surface serial imaging mode. We compared calcein staining of the skeletons of the wild type and nacre mutants, which are transparent zebrafish, with micro-CT for the first 30 days post fertilization embryos, and identified significant differences. We quantified the bone volumes and mineral contents of bones, including otoliths, during development, and showed that such developmental differences, including otolith development, could be helpful in identifying phenotypes. In addition, high-resolution imaging revealed the presence of mineralized aggregates in the notochord, before the formation of the first bone in the axial skeleton. These structures might play a role in the storage of the mineral. Our results highlight the potential of these high-resolution 3D approaches to characterize the zebrafish skeleton, which in turn could prove invaluable information for better understanding the development and the characterization of skeletal phenotypes.

Indexed as

Bone DevelopmentAnimalsCalciumMicroscopy, Electron, ScanningX-Ray MicrotomographyZebrafishCalcium

Identifiers

PMID29220379
PMCPMC5722281

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.