Evidence map›Paper›PMID 29220348›Full record

ArticlePLoS genetics2017

The pea branching RMS2 gene encodes the PsAFB4/5 auxin receptor and is involved in an auxin-strigolactone regulation loop.

Yasmine Ligerot, Alexandre de Saint Germain, Tanya Waldie, Christelle Troadec, Sylvie Citerne, Nikita Kadakia, Jean-Paul Pillot, Michael Prigge, Grégoire Aubert, Abdelhafid Bendahmane and 4 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
9.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 51 citations in OpenAlex.

  1. Article
  2. Article
  3. Creation of new rice germplasm with cross-resistance to auxin herbicides picloram and dicamba by genome editing of OsAFB4.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Lessons from a century of apical dominance research.Journal of experimental botany · 2023
    Article
  9. Article
  10. Article
  11. Article
  12. The Effects of High COInternational journal of molecular sciences · 2022
    Article
  13. Article
  14. Article
  15. Review
  16. Auxin Interactions with Other Hormones in Plant Development.Cold Spring Harbor perspectives in biology · 2021
    Review
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 3 countries.

Yasmine LigerotInstitut Jean-Pierre Bourgin, INRA, AgroParisTech, CNRS, Université Paris-Saclay, Versailles, France.
Alexandre de Saint GermainInstitut Jean-Pierre Bourgin, INRA, AgroParisTech, CNRS, Université Paris-Saclay, Versailles, France.
Tanya WaldieSainsbury Laboratory Cambridge University, Bateman Street, Cambridge, United Kingdom.ORCID http://orcid.org/0000-0001-7760-0950
Christelle TroadecInstitute of Plant Sciences Paris-Saclay, INRA, CNRS, Université Paris-Sud, Université d'Evry, Université Paris-Diderot, Orsay, France.
Sylvie CiterneInstitut Jean-Pierre Bourgin, INRA, AgroParisTech, CNRS, Université Paris-Saclay, Versailles, France.
Nikita KadakiaHoward Hughes Medical Institute and Section of Cell and Developmental Biology, University of California San Diego, La Jolla, California, United States of America.ORCID http://orcid.org/0000-0002-1884-1671
Jean-Paul PillotInstitut Jean-Pierre Bourgin, INRA, AgroParisTech, CNRS, Université Paris-Saclay, Versailles, France.
Michael PriggeHoward Hughes Medical Institute and Section of Cell and Developmental Biology, University of California San Diego, La Jolla, California, United States of America.
Grégoire AubertAgroécologie, AgroSup Dijon, INRA, Université Bourgogne Franche-Comté, Dijon, France.
Abdelhafid BendahmaneInstitute of Plant Sciences Paris-Saclay, INRA, CNRS, Université Paris-Sud, Université d'Evry, Université Paris-Diderot, Orsay, France.
Ottoline LeyserSainsbury Laboratory Cambridge University, Bateman Street, Cambridge, United Kingdom.ORCID http://orcid.org/0000-0003-2161-3829
Mark EstelleHoward Hughes Medical Institute and Section of Cell and Developmental Biology, University of California San Diego, La Jolla, California, United States of America.
Frédéric DebelléLIPM, Université de Toulouse, INRA, CNRS, Castanet-Tolosan, France.
Catherine RameauInstitut Jean-Pierre Bourgin, INRA, AgroParisTech, CNRS, Université Paris-Saclay, Versailles, France.ORCID http://orcid.org/0000-0001-5037-8106
Centre National de la Recherche Scientifique · FRHoward Hughes Medical Institute · USUniversité Paris-Sud · FRUniversity of Cambridge · GBInstitut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement · FR

Funding

MOLECULAR GENETICS OF AUXIN ACTION IN ARABIDOPSISR01GM043644 · NIGMS · UNIVERSITY OF TEXAS AUSTIN · PI ESTELLE, MARK A · 1989 to 2021
$6.0M
Biotechnology and Biological Sciences Research Council BB/E024688/1NIGMS NIH HHS R01 GM043644
6 · The paper itself

Abstract

Strigolactones (SLs) are well known for their role in repressing shoot branching. In pea, increased transcript levels of SL biosynthesis genes are observed in stems of highly branched SL deficient (ramosus1 (rms1) and rms5) and SL response (rms3 and rms4) mutants indicative of negative feedback control. In contrast, the highly branched rms2 mutant has reduced transcript levels of SL biosynthesis genes. Grafting studies and hormone quantification led to a model where RMS2 mediates a shoot-to-root feedback signal that regulates both SL biosynthesis gene transcript levels and xylem sap levels of cytokinin exported from roots. Here we cloned RMS2 using synteny with Medicago truncatula and demonstrated that it encodes a putative auxin receptor of the AFB4/5 clade. Phenotypes similar to rms2 were found in Arabidopsis afb4/5 mutants, including increased shoot branching, low expression of SL biosynthesis genes and high auxin levels in stems. Moreover, afb4/5 and rms2 display a specific resistance to the herbicide picloram. Yeast-two-hybrid experiments supported the hypothesis that the RMS2 protein functions as an auxin receptor. SL root feeding using hydroponics repressed auxin levels in stems and down-regulated transcript levels of auxin biosynthesis genes within one hour. This auxin down-regulation was also observed in plants treated with the polar auxin transport inhibitor NPA. Together these data suggest a homeostatic feedback loop in which auxin up-regulates SL synthesis in an RMS2-dependent manner and SL down-regulates auxin synthesis in an RMS3 and RMS4-dependent manner.

Indexed as

ArabidopsisArabidopsis ProteinsGene Expression Regulation, PlantIndoleacetic AcidsMedicago truncatulaPicloramPisum sativumPlant Growth RegulatorsPlant ProteinsPlant ShootsReceptors, Cell SurfaceSignal TransductionAFB4 protein, ArabidopsisAFB5 protein, ArabidopsisArabidopsis Proteinsauxin receptor, plantIndoleacetic AcidsPicloramPlant Growth RegulatorsPlant ProteinsReceptors, Cell Surface

Identifiers

PMID29220348
PMCPMC5738142
OpenAlexW2772770144

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.