Evidence map›Paper›PMID 29220122›Full record

ArticleCancer science2018

Expression profile analysis of long non-coding RNA in acute myeloid leukemia by microarray and bioinformatics.

Yuandong Feng, Ying Shen, Hongli Chen, Xiaman Wang, Ru Zhang, Yue Peng, Xiaoru Lei, Tian Liu, Jing Liu, Liufang Gu and 6 more

Open access · goldAbstract read
In one paragraph

Article in Cancer science, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed, 1 pooled it
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 1 synthesis or guideline pooled it, 45 citations in OpenAlex.

  1. Pooled it
  2. LncRNA AC098613.1 promotes acute myeloid leukemia cell differentiation through CDC5L/ADAP1/NRD1 axis.Apoptosis : an international journal on programmed cell death · 2026
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  3. Review
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  11. LncRNA-DUXAP8 Regulation of the Wnt/β-Catenin Signaling Pathway to Inhibit Glycolysis and Induced Apoptosis in Acute Myeloid LeukemiaTurkish journal of haematology : official journal of Turkish Society of Haematology · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 2 institutions in 1 country.

Yuandong FengDepartment of Hematology, The Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an, China.
Ying ShenDepartment of Hematology, The Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an, China.
Hongli ChenDepartment of Hematology, The Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an, China.
Xiaman WangDepartment of Hematology, The Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an, China.
Ru ZhangDepartment of Hematology, The Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an, China.
Yue PengDepartment of Hematology, The Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an, China.
Xiaoru LeiDepartment of Hematology, The Xi'an Central Hospital, Xi'an, China.
Tian LiuDepartment of Hematology, The Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an, China.
Jing LiuDepartment of Hematology, The Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an, China.
Liufang GuDepartment of Hematology, The Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an, China.
Fangxia WangDepartment of Hematology, The Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an, China.
Yun YangDepartment of Hematology, The Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an, China.
Ju BaiDepartment of Hematology, The Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an, China.
Jianli WangDepartment of Hematology, The Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an, China.
Wanhong ZhaoDepartment of Hematology, The Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an, China.
Aili HeDepartment of Hematology, The Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an, China.ORCID http://orcid.org/0000-0003-2521-3806
Second Affiliated Hospital of Xi'an Jiaotong University · CNXian Central Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Long non-coding RNAs (lncRNAs) are transcripts longer than 200 nt that are involved in tumorigenesis and play a key role in cancer progression. To determine whether lncRNAs are involved in acute myeloid leukemia (AML), we analyzed the expression profile of lncRNAs and mRNAs in AML. Five pairs of AML patients and iron deficiency anemia (IDA) controls were screened by microarray. Through coexpression analysis, differently expressed transcripts were divided into modules, and lncRNAs were functionally annotated. We further analyzed the clinical significance of crucial lncRNAs from modules in public data. Finally, the expression of three lncRNAs, RP11-222K16.2, AC092580.4, and RP11-305O.6, were validated in newly diagnosed AML, AML relapse, and IDA patient groups by quantitative RT-PCR, which may be associated with AML patients' overall survival. Further analysis showed that RP11-222K16.2 might affect the differentiation of natural killer cells, and promote the immunized evasion of AML by regulating Eomesodermin expression. Analysis of this study revealed that dysregulated lncRNAs and mRNAs in AML vs IDA controls could affect the immune system and hematopoietic cell differentiation. The biological functions of those lncRNAs need to be further validated.

Indexed as

Anemia, Iron-DeficiencyCase-Control StudiesComputational BiologyFemaleGene Expression ProfilingGene Expression Regulation, LeukemicGene Regulatory NetworksHumansLeukemia, Myeloid, AcuteMaleOligonucleotide Array Sequence AnalysisPrognosisProtein Interaction MapsRNA, Long NoncodingSurvival AnalysisRNA, Long Noncodingacute myeloid leukemiabioinformaticslong non-coding RNAmicroarraytranscriptome network

Identifiers

PMID29220122
PMCPMC5797823
OpenAlexW2773858712

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.