Evidence map›Paper›PMID 29217829›Full record

ArticleHeredity2018

Genome-wide genotyping uncovers genetic profiles and history of the Russian cattle breeds.

Andrey Yurchenko, Nikolay Yudin, Ruslan Aitnazarov, Alexandra Plyusnina, Vladimir Brukhin, Vladimir Soloshenko, Bulat Lhasaranov, Ruslan Popov, Ivan A Paronyan, Kirill V Plemyashov and 1 more

Abstract read
In one paragraph

Article in Heredity, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

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  12. Genetic Differentiation among Livestock Breeds-Values for FAnimals : an open access journal from MDPI · 2022
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  18. Microsatellite Diversity and Phylogenetic Relationships among East EurasianAnimals : an open access journal from MDPI · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Andrey YurchenkoThe Federal Research Center Institute of Cytology and Genetics, The Siberian Branch of the Russian Academy of Sciences (ICG SB RAS), 630090, Novosibirsk, Russia.
Nikolay YudinThe Federal Research Center Institute of Cytology and Genetics, The Siberian Branch of the Russian Academy of Sciences (ICG SB RAS), 630090, Novosibirsk, Russia.
Ruslan AitnazarovThe Federal Research Center Institute of Cytology and Genetics, The Siberian Branch of the Russian Academy of Sciences (ICG SB RAS), 630090, Novosibirsk, Russia.
Alexandra PlyusninaThe Federal Research Center Institute of Cytology and Genetics, The Siberian Branch of the Russian Academy of Sciences (ICG SB RAS), 630090, Novosibirsk, Russia.
Vladimir BrukhinTheodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, St. Petersburg, 199034, Russia.
Vladimir SoloshenkoSiberian Research Institute of Animal Husbandry, 630501, Krasnoobsk, Russia.
Bulat LhasaranovShuluuma IAPC, Kizhinga, 671450, Buryatia, Russia.
Ruslan PopovYakutian Research Institute of Agriculture, 677001, Yakutsk, Russia.
Ivan A ParonyanRussian Research Institute of Farm Animal Genetics and Breeding, 196601, St. Petersburg, Russia.
Kirill V PlemyashovRussian Research Institute of Farm Animal Genetics and Breeding, 196601, St. Petersburg, Russia.
Denis M LarkinThe Federal Research Center Institute of Cytology and Genetics, The Siberian Branch of the Russian Academy of Sciences (ICG SB RAS), 630090, Novosibirsk, Russia. dmlarkin@gmail.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

One of the most economically important areas within the Russian agricultural sector is dairy and beef cattle farming contributing about $11 billion to the Russian economy annually. Trade connections, selection and breeding have resulted in the establishment of a number of breeds that are presumably adapted to local climatic conditions. Little however is known about the ancestry and history of Russian native cattle. To address this question, we genotyped 274 individuals from 18 breeds bred in Russia and compared them to 135 additional breeds from around the world that had been genotyped previously. Our results suggest a shared ancestry between most of the Russian cattle and European taurine breeds, apart from a few breeds that shared ancestry with the Asian taurines. The Yakut cattle, belonging to the latter group, was found to be the most diverged breed in the whole combined dataset according to structure results. Haplotype sharing further suggests that the Russian cattle can be divided into four major clusters reflecting ancestral relations with other breeds. Herein, we therefore shed light on to the history of Russian cattle and identified closely related breeds to those from Russia. Our results will facilitate future research on detecting signatures of selection in cattle genomes and eventually inform future genetics-assisted livestock breeding programs in Russia and in other countries.

Indexed as

BreedingGenetic ProfileGenetics, PopulationAnimalsCattleGenotyping TechniquesHaplotypesLinkage DisequilibriumPolymorphism, Single NucleotideRussia

Identifiers

PMID29217829
PMCPMC5837115

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.