Evidence map›Paper›PMID 29217587›Full record

ArticleScience (New York, N.Y.)2018

Different mutational rates and mechanisms in human cells at pregastrulation and neurogenesis.

Taejeong Bae, Livia Tomasini, Jessica Mariani, Bo Zhou, Tanmoy Roychowdhury, Daniel Franjic, Mihovil Pletikos, Reenal Pattni, Bo-Juen Chen, Elisa Venturini and 5 more

Abstract read
In one paragraph

Article in Science (New York, N.Y.), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 169 papers.

0numbers the graph read from it
0cells of the map it votes in
169citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

169 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Disease insights from brain somatic mosaicism.Experimental & molecular medicine · 2026
    Review
  7. Article
  8. Morphogen Gradients as Drivers of Mosaicism During Early Human Development.BioEssays : news and reviews in molecular, cellular and developmental biology · 2026
    Review
  9. Review
  10. Review
  11. Article
  12. Review
  13. Review
  14. Article
  15. DNA polymerase β suppresses somatic indels at CpG dinucleotides in developing cortical neurons.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  16. Quantitative and sensitive sequencing of somatic mutations induced by a maize transposon.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  17. Article
  18. Article
  19. Review
  20. Article

109 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors.

Taejeong BaeDepartment of Health Sciences Research, Mayo Clinic, Rochester, MN 55905, USA.ORCID 0000-0002-4626-3725
Livia TomasiniChild Study Center, Yale University, New Haven, CT 06520, USA.
Jessica MarianiChild Study Center, Yale University, New Haven, CT 06520, USA.
Bo ZhouDepartments of Psychiatry and Genetics, Stanford University, Palo Alto, CA 94305, USA.ORCID 0000-0001-6533-7462
Tanmoy RoychowdhuryDepartment of Health Sciences Research, Mayo Clinic, Rochester, MN 55905, USA.ORCID 0000-0002-1187-1720
Daniel FranjicDepartment of Neuroscience, Yale University, New Haven, CT 06520, USA.
Mihovil PletikosDepartment of Neuroscience, Yale University, New Haven, CT 06520, USA.
Reenal PattniDepartments of Psychiatry and Genetics, Stanford University, Palo Alto, CA 94305, USA.ORCID 0000-0003-4490-731X
Bo-Juen ChenNew York Genome Center, New York, NY 10013, USA.ORCID 0000-0001-7708-3076
Elisa VenturiniNew York Genome Center, New York, NY 10013, USA.
Bridget Riley-GillisNew York Genome Center, New York, NY 10013, USA.
Nenad SestanDepartment of Neuroscience, Yale University, New Haven, CT 06520, USA.ORCID 0000-0003-0966-9619
Alexander E UrbanDepartments of Psychiatry and Genetics, Stanford University, Palo Alto, CA 94305, USA.ORCID 0000-0001-9772-933X
Alexej AbyzovDepartment of Health Sciences Research, Mayo Clinic, Rochester, MN 55905, USA. abyzov.alexej@mayo.edu flora.vaccarino@yale.edu.ORCID 0000-0001-5405-6729
Flora M VaccarinoChild Study Center, Yale University, New Haven, CT 06520, USA. abyzov.alexej@mayo.edu flora.vaccarino@yale.edu.ORCID 0000-0003-2167-981X

Funding

Functional Genomics of Human Brain DevelopmentP50MH106934 · NIMH · YALE UNIVERSITY · PI SESTAN, NENAD · 2014 to 2019
$7.9M
Somatic Mosaicism in the Brain of Tourette SyndromeU01MH106876 · NIMH · YALE UNIVERSITY · PI VACCARINO, FLORA M · 2015 to 2019
$6.1M
2/2 Somatic mosaicism and autism spectrum disorderU01MH106874 · NIMH · YALE UNIVERSITY · PI SESTAN, NENAD · 2015 to 2019
$4.0M
Genomic mosaicism in developing human brainR01MH100914 · NIMH · YALE UNIVERSITY · PI GERSTEIN, MARK BENDER, VACCARINO, FLORA M · 2014 to 2018
$3.5M
YALE BIOMEDICAL SUPERCOMPUTER: NEUROSCIENCES10RR019895 · NCRR · YALE UNIVERSITY · PI WILLIAMS, KENNETH ROBERT · 2004 to 2004
$1.6M
High Performance Computing Instrumentation for Yale University Biomedical HPC CenS10RR029676 · NCRR · YALE UNIVERSITY · PI BJORNSON, ROBERT DEAN · 2011 to 2011
$588k
Discovering the spectrum of natural somatic mosaicism in human skin fibroblastsR03CA191421 · NCI · MAYO CLINIC ROCHESTER · PI ABYZOV, ALEXEJ · 2015 to 2016
$177k
NCI NIH HHS R03 CA191421NCRR NIH HHS S10 RR019895NCRR NIH HHS S10 RR029676NIMH NIH HHS P50 MH106934NIMH NIH HHS R01 MH100914NIMH NIH HHS U01 MH106874NIMH NIH HHS U01 MH106876
6 · The paper itself

Abstract

Somatic mosaicism in the human brain may alter function of individual neurons. We analyzed genomes of single cells from the forebrains of three human fetuses (15 to 21 weeks postconception) using clonal cell populations. We detected 200 to 400 single-nucleotide variations (SNVs) per cell. SNV patterns resembled those found in cancer cell genomes, indicating a role of background mutagenesis in cancer. SNVs with a frequency of >2% in brain were also present in the spleen, revealing a pregastrulation origin. We reconstructed cell lineages for the first five postzygotic cleavages and calculated a mutation rate of ~1.3 mutations per division per cell. Later in development, during neurogenesis, the mutation spectrum shifted toward oxidative damage, and the mutation rate increased. Both neurogenesis and early embryogenesis exhibit substantially more mutagenesis than adulthood.

Indexed as

MosaicismMutagenesisMutation RateBrainCell LineageGastrulationGenome, HumanHumansMutationNeoplasmsNeurogenesisNeuronsPolymorphism, Single NucleotideSingle-Cell Analysis

Identifiers

PMID29217587
PMCPMC6311130

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.