Evidence map›Paper›PMID 29217584›Full record

ArticleScience (New York, N.Y.)2018

Aging and neurodegeneration are associated with increased mutations in single human neurons.

Michael A Lodato, Rachel E Rodin, Craig L Bohrson, Michael E Coulter, Alison R Barton, Minseok Kwon, Maxwell A Sherman, Carl M Vitzthum, Lovelace J Luquette, Chandri N Yandava and 7 more

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Science (New York, N.Y.), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 378 papers.

0numbers the graph read from it
0cells of the map it votes in
378citing papers in PubMed
29.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

378 citing papers in PubMed, 642 citations in OpenAlex.

  1. Review
  2. Article
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  8. Article
  9. Somatic mutations and genome mosaicism in aging and disease.Experimental & molecular medicine · 2026
    Review
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  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
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318 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors at 5 institutions in 1 country.

Michael A LodatoDivision of Genetics and Genomics, Manton Center for Orphan Disease, and Howard Hughes Medical Institute, Boston Children's Hospital, Boston, MA, USA.ORCID 0000-0003-4175-1073
Rachel E RodinDivision of Genetics and Genomics, Manton Center for Orphan Disease, and Howard Hughes Medical Institute, Boston Children's Hospital, Boston, MA, USA.ORCID 0000-0001-9826-7827
Craig L BohrsonDepartment of Biomedical Informatics, Harvard Medical School, Boston, MA, USA.ORCID 0000-0003-4063-4844
Michael E CoulterDivision of Genetics and Genomics, Manton Center for Orphan Disease, and Howard Hughes Medical Institute, Boston Children's Hospital, Boston, MA, USA.ORCID 0000-0003-0357-351X
Alison R BartonDepartment of Biomedical Informatics, Harvard Medical School, Boston, MA, USA.ORCID 0000-0003-0882-0196
Minseok KwonDepartment of Biomedical Informatics, Harvard Medical School, Boston, MA, USA.ORCID 0000-0001-8070-382X
Maxwell A ShermanDepartment of Biomedical Informatics, Harvard Medical School, Boston, MA, USA.ORCID 0000-0002-5297-9252
Carl M VitzthumDepartment of Biomedical Informatics, Harvard Medical School, Boston, MA, USA.ORCID 0000-0002-3075-2305
Lovelace J LuquetteDepartment of Biomedical Informatics, Harvard Medical School, Boston, MA, USA.
Chandri N YandavaComputational Statistics and Bioinformatics Group, Advanced Artificial Intelligence Research Laboratory, WuXi NextCODE, Cambridge, MA, USA.
Pengwei YangComputational Statistics and Bioinformatics Group, Advanced Artificial Intelligence Research Laboratory, WuXi NextCODE, Cambridge, MA, USA.ORCID 0000-0003-4504-9441
Thomas W ChittendenComputational Statistics and Bioinformatics Group, Advanced Artificial Intelligence Research Laboratory, WuXi NextCODE, Cambridge, MA, USA.ORCID 0000-0002-4414-0262
Nicole E HatemDivision of Genetics and Genomics, Manton Center for Orphan Disease, and Howard Hughes Medical Institute, Boston Children's Hospital, Boston, MA, USA.ORCID 0000-0002-5810-0608
Steven C RyuDivision of Genetics and Genomics, Manton Center for Orphan Disease, and Howard Hughes Medical Institute, Boston Children's Hospital, Boston, MA, USA.ORCID 0000-0003-0620-9609
Mollie B WoodworthDivision of Genetics and Genomics, Manton Center for Orphan Disease, and Howard Hughes Medical Institute, Boston Children's Hospital, Boston, MA, USA.ORCID 0000-0003-2130-2289
Peter J ParkDepartment of Biomedical Informatics, Harvard Medical School, Boston, MA, USA. peter_park@hms.harvard.edu christopher.walsh@childrens.harvard.edu.ORCID 0000-0001-9378-960X
Christopher A WalshDivision of Genetics and Genomics, Manton Center for Orphan Disease, and Howard Hughes Medical Institute, Boston Children's Hospital, Boston, MA, USA. peter_park@hms.harvard.edu christopher.walsh@childrens.harvard.edu.ORCID 0000-0002-0156-2238
Broad Institute · USHarvard University · USIntel (United States) · USBoston Children's Hospital · USBrigham and Women's Hospital · US

Funding

Medical Scientist Training ProgramT32GM007753 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WALENSKY, LOREN DAVID · 1985 to 2021
$50.0M
Research ProjectP50MH106933 · NIMH · HARVARD MEDICAL SCHOOL · PI KOHANE, ISAAC S. · 2014 to 2018
$17.0M
Training Program in Bioinformatics and Integrative GenomicsT32HG002295 · NHGRI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI Peter J Park · 2001 to 2026
$15.8M
Cell Identity Determination In Human Brain: Somatic Mutation and Cell LineageR01NS032457 · NINDS · BOSTON CHILDREN'S HOSPITAL · PI Alice Eunjung Lee, Christopher A. Walsh · 1995 to 2026
$12.7M
1/2-Somatic mosaicism and autism spectrum disorderU01MH106883 · NIMH · BOSTON CHILDREN'S HOSPITAL · PI PARK, PETER J, WALSH, CHRISTOPHER A. · 2015 to 2019
$9.2M
Mouse Neurodevelopmental Behavior CoreU54HD090255 · NICHD · BOSTON CHILDREN'S HOSPITAL · PI SAHIN, MUSTAFA · 2016 to 2020
$5.2M
Orchestra: A high performance biomedical supercomputing collaborativeS10RR028832 · NCRR · HARVARD MEDICAL SCHOOL · PI DANUSER, GAUDENZ · 2010 to 2010
$3.7M
Single-cell analysis of somatic mutation in aging and neurodegenerative disease in the human brainK99AG054748 · NIA · BOSTON CHILDREN'S HOSPITAL · PI LODATO, MICHAEL ANTHONY · 2017 to 2018
$260k
Quantitation and biochemical characterization of autophagy's role in agingK99AG050749 · NIA · SCRIPPS RESEARCH INSTITUTE, THE · PI DAVIS, JOSEPH HARRY · 2015 to 2016
$257k
A Novel Essential Gene for Human Cognitive FunctionF30MH102909 · NIMH · HARVARD MEDICAL SCHOOL · PI COULTER, MICHAEL EDWARD · 2013 to 2017
$173k
Howard Hughes Medical InstituteNCRR NIH HHS S10 RR028832NHGRI NIH HHS T32 HG002295NIA NIH HHS K99 AG050749NIA NIH HHS K99 AG054748NICHD NIH HHS U54 HD090255NIGMS NIH HHS T32 GM007753NIMH NIH HHS F30 MH102909NIMH NIH HHS P50 MH106933NIMH NIH HHS U01 MH106883NINDS NIH HHS R01 NS032457
6 · The paper itself

Abstract

It has long been hypothesized that aging and neurodegeneration are associated with somatic mutation in neurons; however, methodological hurdles have prevented testing this hypothesis directly. We used single-cell whole-genome sequencing to perform genome-wide somatic single-nucleotide variant (sSNV) identification on DNA from 161 single neurons from the prefrontal cortex and hippocampus of 15 normal individuals (aged 4 months to 82 years), as well as 9 individuals affected by early-onset neurodegeneration due to genetic disorders of DNA repair (Cockayne syndrome and xeroderma pigmentosum). sSNVs increased approximately linearly with age in both areas (with a higher rate in hippocampus) and were more abundant in neurodegenerative disease. The accumulation of somatic mutations with age-which we term genosenium-shows age-related, region-related, and disease-related molecular signatures and may be important in other human age-associated conditions.

Indexed as

Mutation RateAdolescentAdultAgedAged, 80 and overAge FactorsAgingChildChild, PreschoolCockayne SyndromeDNA Mutational AnalysisDNA RepairFemaleHippocampusHumansInfant

Identifiers

PMID29217584
PMCPMC5831169
OpenAlexW2774506962

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.