Evidence map›Paper›PMID 29215649›Full record

ArticleGenetics in medicine : official journal of the American College of Medical Genetics2018

A craniosynostosis massively parallel sequencing panel study in 309 Australian and New Zealand patients: findings and recommendations.

Eric Lee, Trang Le, Ying Zhu, George Elakis, Anne Turner, William Lo, Hanka Venselaar, Carol-Ann Verrenkamp, Nicole Snow, David Mowat and 29 more

Open access · bronzeAbstract read
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In one paragraph

Article in Genetics in medicine : official journal of the American College of Medical Genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 3 pooled it
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 3 syntheses or guidelines pooled it, 39 citations in OpenAlex.

  1. Genetics versus environment in the pathophysiology of sagittal synostosis.Child's nervous system : ChNS : official journal of the International Society for Pediatric Neurosurgery · 2026
    Pooled it
  2. The role of pathogenic TCF12 variants in children with coronal craniosynostosis-a systematic review with addition of two novel cases.Child's nervous system : ChNS : official journal of the International Society for Pediatric Neurosurgery · 2024
    Pooled it
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  10. Deletion ofCold Spring Harbor molecular case studies · 2021
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  16. Trio-Based Whole-Exome Sequencing Identifies aFrontiers in pediatrics · 2020
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  19. Two novel variants in theThe application of clinical genetics · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

39 authors at 17 institutions in 6 countries.

Eric LeeGenetics Laboratory, NSW Health Pathology East, Sydney, Australia.
Trang LeGenetics Laboratory, NSW Health Pathology East, Sydney, Australia.
Ying ZhuGenetics Laboratory, NSW Health Pathology East, Sydney, Australia.
George ElakisGenetics Laboratory, NSW Health Pathology East, Sydney, Australia.
Anne TurnerCentre for Clinical Genetics, Sydney Children's Hospital, Randwick, Australia.
William LoGenetics Laboratory, NSW Health Pathology East, Sydney, Australia.
Hanka VenselaarCentre for Molecular and Biomolecular Informatics, Radboud University Nijmegen Medical Centre, Nijmegen, The Netherlands.
Carol-Ann VerrenkampCentre for Clinical Genetics, Sydney Children's Hospital, Randwick, Australia.
Nicole SnowCentre for Clinical Genetics, Sydney Children's Hospital, Randwick, Australia.
David MowatCentre for Clinical Genetics, Sydney Children's Hospital, Randwick, Australia.
Edwin Philip KirkGenetics Laboratory, NSW Health Pathology East, Sydney, Australia.
Rani SachdevCentre for Clinical Genetics, Sydney Children's Hospital, Randwick, Australia.
Janine SmithThe Children's Hospital at Westmead, Sydney, Australia.
Natasha Jane BrownDepartment of Clinical Genetics, Austin Health, Melbourne, Australia.
Mathew WallisDepartment of Clinical Genetics, Austin Health, Melbourne, Australia.
Chris BarnettSouth Australian Clinical Genetics Service, SA Pathology, Adelaide, Australia.
Fiona McKenzieKing Edward Memorial Hospital, Perth, Australia.
Mary-Louise FreckmannDepartment of Clinical Genetics, Royal North Shore Hospital, Sydney, Australia.
Felicity CollinsThe Children's Hospital at Westmead, Sydney, Australia.
Maya ChopraImagine Institute of Genetic Diseases, Paris, France.
Nerine GregersenGenetic Health Service New Zealand, Auckland, New Zealand.
Ian HayesGenetic Health Service New Zealand, Auckland, New Zealand.
Sulekha RajagopalanDepartment of Clinical Genetics, Liverpool Hospital, Sydney, Australia.
Tiong Yang TanVictorian Clinical Genetics Services, Melbourne, Australia.
Zornitza StarkVictorian Clinical Genetics Services, Melbourne, Australia.
Ravi SavarirayanVictorian Clinical Genetics Services, Melbourne, Australia.
Alison YeungVictorian Clinical Genetics Services, Melbourne, Australia.
Lesley AdèsThe Children's Hospital at Westmead, Sydney, Australia.
Michael GattasBrisbane Genetics, Brisbane, Australia.
Kate GibsonGenetic Health Service New Zealand, Christchurch Hospital, Christchurch, New Zealand.
Michael GabbettRoyal Brisbane & Women's Hospital, Brisbane, Australia.
David John AmorVictorian Clinical Genetics Services, Melbourne, Australia.
Wanda LattanziInstitute of Anatomy and Cell Biology, Università Cattolica del Sacro Cuore, Rome, Italy.
Simeon BoydDepartment of Pediatrics, School of Medicine UC Davis MIND Institute, Sacramento, USA.
Eric HaanSouth Australian Clinical Genetics Service, SA Pathology, Adelaide, Australia.
Mark GianoutsosCraniofacial Unit, Sydney Children's Hospital, Randwick, Australia.
Timothy Chilton CoxDivision of Genetic Medicine, Department of Pediatrics, University of Washington, Seattle, Washington, USA.
Michael Francis BuckleyGenetics Laboratory, NSW Health Pathology East, Sydney, Australia.
Tony RoscioliCentre for Clinical Genetics, Sydney Children's Hospital, Randwick, Australia. tony.roscioli@health.nsw.gov.au.
New South Wales Department of Health · AUSydney Children's Hospital · AURoyal Children's Hospital · AUChildren's Hospital at Westmead · AUAustin Health · AUSouth Australia Pathology · AUBrisbane School of Theology · AUChristchurch Hospital · NZInstitut des Maladies Génétiques Imagine · FRKing Edward Memorial Hospital · AULiverpool Hospital · AURadboud University Nijmegen · NLRoyal Brisbane and Women's Hospital · AURoyal North Shore Hospital · AUUniversità Cattolica del Sacro Cuore · ITUniversity of California Davis Medical Center · USUniversity of Washington · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeThe craniosynostoses are characterized by premature fusion of one or more cranial sutures. The relative contribution of previously reported genes to craniosynostosis in large cohorts is unclear. Here we report on the use of a massively parallel sequencing panel in individuals with craniosynostosis without a prior molecular diagnosis.

methodsA 20-gene panel was designed based on the genes' association with craniosynostosis, and clinically validated through retrospective testing of an Australian and New Zealand cohort of 233 individuals with craniosynostosis in whom previous testing had not identified a causative variant within FGFR1-3 hot-spot regions or the TWIST1 gene. An additional 76 individuals were tested prospectively.

resultsPathogenic or likely pathogenic variants in non-FGFR genes were identified in 43 individuals, with diagnostic yields of 14% and 15% in retrospective and prospective cohorts, respectively. Variants were identified most frequently in TCF12 (N = 22) and EFNB1 (N = 8), typically in individuals with nonsyndromic coronal craniosynostosis or TWIST1-negative clinically suspected Saethre-Chotzen syndrome. Clinically significant variants were also identified in ALX4, EFNA4, ERF, and FGF10.

conclusionThese findings support the clinical utility of a massively parallel sequencing panel for craniosynostosis. TCF12 and EFNB1 should be included in genetic testing for nonsyndromic coronal craniosynostosis or clinically suspected Saethre-Chotzen syndrome.

Indexed as

AustraliaBasic Helix-Loop-Helix ProteinsCohort StudiesCranial SuturesCraniosynostosesDNA-Binding ProteinsEphrin-B1FemaleFibroblast Growth Factor 10Genetic TestingHigh-Throughput Nucleotide SequencingHumansMaleNew ZealandNuclear ProteinsProspective StudiesALX4 protein, humanBasic Helix-Loop-Helix ProteinsDNA-Binding ProteinsEFNB1 protein, humanEphrin-B1ERF protein, humanFGF10 protein, humanFGFR1 protein, humanFibroblast Growth Factor 10Nuclear ProteinsReceptor, Fibroblast Growth Factor, Type 1Repressor ProteinsTCF12 protein, humanTranscription FactorsTWIST1 protein, humanTwist-Related Protein 1coronalcraniosynostosisEFNB1panelTCF12

Identifiers

PMID29215649
OpenAlexW2772827727

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.