Evidence map›Paper›PMID 29213305›Full record

ArticleJournal of biological engineering2017

A multiplexed magnetic tweezer with precision particle tracking and bi-directional force control.

Keith C Johnson, Emilie Clemmens, Hani Mahmoud, Robin Kirkpatrick, Juan C Vizcarra, Wendy E Thomas

Abstract read
In one paragraph

Article in Journal of biological engineering, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Force spectroscopy with electromagnetic tweezers.Journal of applied physics · 2021
    Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Keith C JohnsonMechanical Engineering, University of Washington, Seattle, USA.
Emilie ClemmensBioengineering, University of Washington, Seattle, USA.
Hani MahmoudBioengineering, University of Washington, Seattle, USA.
Robin KirkpatrickBioengineering, University of Washington, Seattle, USA.
Juan C VizcarraBioengineering, University of Washington, Seattle, USA.
Wendy E ThomasBioengineering, University of Washington, Seattle, USA.ORCID 0000-0001-8602-0819

Funding

Conformational dynamics of adhesive bondsR01AI119675 · NIAID · UNIVERSITY OF WASHINGTON · PI SOKURENKO, EVGENI VENIAMINOVIC, THOMAS, WENDY E · 2016 to 2020
$2.9M
Biosynthetic and Functional Consequences of von Willebrand Disease MutationsR01HL117639 · NHLBI · BLOODWORKS · PI LOPEZ, JOSE ARON · 2013 to 2017
$2.9M
Regulation of von Willebrand Factor - platelet binding by Force and Interdomain IR01HL106074 · NHLBI · UNIVERSITY OF WASHINGTON · PI THOMAS, WENDY E · 2011 to 2015
$2.1M
NHLBI NIH HHS R01 HL106074NHLBI NIH HHS R01 HL117639NIAID NIH HHS R01 AI119675
6 · The paper itself

Abstract

backgroundIn the past two decades, methods have been developed to measure the mechanical properties of single biomolecules. One of these methods, Magnetic tweezers, is amenable to aquisition of data on many single molecules simultaneously, but to take full advantage of this "multiplexing" ability, it is necessary to simultaneously incorprorate many capabilities that ahve been only demonstrated separately.

methodsOur custom built magnetic tweezer combines high multiplexing, precision bead tracking, and bi-directional force control into a flexible and stable platform for examining single molecule behavior. This was accomplished using electromagnets, which provide high temporal control of force while achieving force levels similar to permanent magnets via large paramagnetic beads.

resultsHere we describe the instrument and its ability to apply 2-260 pN of force on up to 120 beads simultaneously, with a maximum spatial precision of 12 nm using a variety of bead sizes and experimental techniques. We also demonstrate a novel method for increasing the precision of force estimations on heterogeneous paramagnetic beads using a combination of density separation and bi-directional force correlation which reduces the coefficient of variation of force from 27% to 6%. We then use the instrument to examine the force dependence of uncoiling and recoiling velocity of type 1 fimbriae from

conclusionThis platform provides a simple, effective, and flexible method for efficiently gathering single molecule force spectroscopy measurements.

Indexed as

Magnetic tweezerMultiplexingSingle molecule force spectroscopy

Identifiers

PMID29213305
PMCPMC5712100

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.