Evidence map›Paper›PMID 29211802›Full record

ArticlePloS one2017

Hidden α-helical propensity segments within disordered regions of the transcriptional activator CHOP.

Ángeles Canales, Marcel Rösinger, Javier Sastre, Isabella C Felli, Jesús Jiménez-Barbero, Guillermo Giménez-Gallego, Carlos Fernández-Tornero

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

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  5. Acetaldehyde Induces NeurotoxicityOxidative medicine and cellular longevity · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Ángeles CanalesDepartamento de Química Orgánica I, Universidad Complutense de Madrid, Madrid, Spain.
Marcel RösingerCentro de Investigaciones Biológicas, CSIC, Madrid, Spain.
Javier SastreCentro de Investigaciones Biológicas, CSIC, Madrid, Spain.
Isabella C FelliMagnetic Resonance Center & Department of Chemistry, University of Florence, Sesto Fiorentino, Italy.
Jesús Jiménez-BarberoCentro de Investigaciones Biológicas, CSIC, Madrid, Spain.
Guillermo Giménez-GallegoCentro de Investigaciones Biológicas, CSIC, Madrid, Spain.
Carlos Fernández-TorneroCentro de Investigaciones Biológicas, CSIC, Madrid, Spain.ORCID http://orcid.org/0000-0001-5097-731X
Centro de Investigaciones Biológicas Margarita Salas · ESInteruniversity Consortium for Magnetic Resonance · ITUniversidad Complutense de Madrid · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

C/EBP-homologous protein (CHOP) is a key determinant of the apoptotic response to endoplasmic reticulum stress or DNA damage. As a member of the C/EBP family, CHOP contains a low complexity N-terminal region involved in transcriptional activation, followed by a bZIP that binds DNA after dimerization. However, in contrast to other C/EBPs, CHOP directs binding to non-canonical C/EBP sites due to unique substitutions in its DNA-binding domain. Herein, we show that the N-terminal region of CHOP is intrinsically unstructured but contains two segments presenting α-helical propensity. One of these segments is conserved in other C/EBPs and mediates essential roles of CHOP, including regulation through phosphorylation. The second segment is placed within a proteolytic-resistant portion of the protein and exhibits reduced flexibility. Moreover, the DNA-binding region of CHOP also contains a segment with α-helical character towards its most N-terminal part. Our results suggest that structure-prone segments scattered within disordered regions may be critical for macromolecular recognition during CHOP-mediated transcriptional activation.

Indexed as

CCAAT-Enhancer-Binding ProteinsDimerizationHumansNuclear Magnetic Resonance, BiomolecularPhosphorylationProtein Conformation, alpha-HelicalTranscription Factor CHOPCCAAT-Enhancer-Binding ProteinsTranscription Factor CHOP

Identifiers

PMID29211802
PMCPMC5718554
OpenAlexW2773477047

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.