Evidence map›Paper›PMID 29211035›Full record

ArticleViruses2017

High-Resolution Structure Analysis of Antibody V5 and U4 Conformational Epitopes on Human Papillomavirus 16.

Jian Guan, Stephanie M Bywaters, Sarah A Brendle, Robert E Ashley, Alexander M Makhov, James F Conway, Neil D Christensen, Susan Hafenstein

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Jian GuanDepartment of Medicine, The Pennsylvania State University College of Medicine, 500 University Drive, Hershey, PA 17033, USA. fuyougj@gmail.com.ORCID 0000-0003-1990-5435
Stephanie M BywatersDepartment of Pathology, The Pennsylvania State University College of Medicine, 500 University Drive, Hershey, PA 17033, USA. smb581@psu.edu.
Sarah A BrendleDepartment of Pathology, The Pennsylvania State University College of Medicine, 500 University Drive, Hershey, PA 17033, USA. ganzelly@gmail.com.
Robert E AshleyDepartment of Medicine, The Pennsylvania State University College of Medicine, 500 University Drive, Hershey, PA 17033, USA. bobashley@gmail.com.
Alexander M MakhovDepartment of Structural Biology, University of Pittsburgh School of Medicine, 3501 5th Ave, Pittsburgh, PA 15260, USA. amm241@pitt.edu.
James F ConwayDepartment of Structural Biology, University of Pittsburgh School of Medicine, 3501 5th Ave, Pittsburgh, PA 15260, USA. jxc100@pitt.edu.ORCID 0000-0002-6581-4748
Neil D ChristensenDepartment of Pathology, The Pennsylvania State University College of Medicine, 500 University Drive, Hershey, PA 17033, USA. ndc1@psu.edu.
Susan HafensteinDepartment of Medicine, The Pennsylvania State University College of Medicine, 500 University Drive, Hershey, PA 17033, USA. shafenstein@psu.edu.
Pennsylvania State University · USUniversity of Pittsburgh · US

Funding

VIRUSES AND CANCERT32CA060395 · NCI · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI MEYERS, CRAIG M · 1994 to 2021
$4.3M
Acquisition of a Cryo-Electron MicroscopeS10OD011986 · OD · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI HAFENSTEIN, SUSAN · 2012 to 2012
$600k
Direct electron detecting (DED) cameraS10OD019995 · OD · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CONWAY, JAMES F. · 2015 to 2015
$548k
NCI NIH HHS T32 CA060395NIH HHS S10 OD011986NIH HHS S10 OD019995
6 · The paper itself

Abstract

Cancers attributable to human papillomavirus (HPV) place a huge burden on the health of both men and women. The current commercial vaccines are genotype specific and provide little therapeutic benefit to patients with existing HPV infections. Identifying the conformational epitopes on the virus capsid supports the development of improved recombinant vaccines to maximize long-term protection against multiple types of HPV. Fragments of antibody (Fab) digested from the neutralizing monoclonal antibodies H16.V5 (V5) and H16.U4 (U4) were bound to HPV16 capsids and the structures of the two virus-Fab complexes were solved to near atomic resolution using cryo-electron microscopy. The structures reveal virus conformational changes, the Fab-binding mode to the capsid, the residues comprising the epitope and indicate a potential interaction of U4 with the minor structural protein, L2. Competition enzyme-linked immunosorbent assay (ELISA) showed V5 outcompetes U4 when added sequentially, demonstrating a steric interference even though the footprints do not overlap. Combined with our previously reported immunological and structural results, we propose that the virus may initiate host entry through an interaction between the icosahedral five-fold vertex of the capsid and receptors on the host cell. The highly detailed epitopes identified for the two antibodies provide a framework for continuing biochemical, genetic and biophysical studies.

Indexed as

Antibodies, MonoclonalAntibodies, NeutralizingAntibodies, ViralCapsid ProteinsCryoelectron MicroscopyEnzyme-Linked Immunosorbent AssayEpitopesHuman papillomavirus 16Immunoglobulin Fab FragmentsModels, MolecularProtein BindingProtein ConformationVirus InternalizationAntibodies, MonoclonalAntibodies, NeutralizingAntibodies, ViralCapsid ProteinsEpitopesImmunoglobulin Fab Fragmentsantibody neutralizationcompetitioncomplexconformational epitopecryo-electron Microscopy (cryo-EM)fabhuman papillomavirussteric clashU4 and V5virus

Identifiers

PMID29211035
PMCPMC5744149
OpenAlexW2775376782

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.