Evidence map›Paper›PMID 29207610›Full record

ArticleOncotarget2017

Integration of microRNAome, proteomics and metabolomics to analyze arsenic-induced malignant cell transformation.

Youyou Zhou, Yanfu Wang, Juan Su, Zheng Wu, Chao Wang, Weiming Zhong, Xiaomei Liu, Linhui Cui, Xiaoyu Zhou, Yufang Ma and 7 more

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
  2. miRNAs and arsenic-induced carcinogenesis.Advances in pharmacology (San Diego, Calif.) · 2023
    Review
  3. Review
  4. Current Knowledge in Skin Metabolomics: Updates from Literature Review.International journal of molecular sciences · 2022
    Review
  5. Article
  6. Article
  7. Review
  8. Observational
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 4 institutions in 1 country.

Youyou ZhouDepartment of Dermatology, Xiangya Hospital, Central South University, Changsha 410008, Hunan, China.
Yanfu WangDepartment of Gerontology, The First Affiliated Hospital of Dalian Medical University, Dalian 116011, Liaoning, China.
Juan SuDepartment of Dermatology, Xiangya Hospital, Central South University, Changsha 410008, Hunan, China.
Zheng WuDepartment of Dermatology, The First Affiliated Hospital of Dalian Medical University, Dalian 116011, Liaoning, China.
Chao WangDepartment of Dermatology, The First Affiliated Hospital of Dalian Medical University, Dalian 116011, Liaoning, China.
Weiming ZhongDepartment of Neurosurgery, Xiangya Hospital, Central South University, Changsha 410008, Hunan, China.
Xiaomei LiuDepartment of Dermatology, The First Affiliated Hospital of Dalian Medical University, Dalian 116011, Liaoning, China.
Linhui CuiDepartment of Dermatology, The First Affiliated Hospital of Dalian Medical University, Dalian 116011, Liaoning, China.
Xiaoyu ZhouDepartment of Dermatology, The First Affiliated Hospital of Dalian Medical University, Dalian 116011, Liaoning, China.
Yufang MaDepartment of Biochemistry and Molecular Biology, Dalian Medical University, Dalian 116044, Liaoning, China.
Yi XinDepartment of Biochemistry and Molecular Biology, Dalian Medical University, Dalian 116044, Liaoning, China.
Jianglin ZhangDepartment of Dermatology, Xiangya Hospital, Central South University, Changsha 410008, Hunan, China.
Lisha WuDepartment of Dermatology, Xiangya Hospital, Central South University, Changsha 410008, Hunan, China.
Xing HuDepartment of Dermatology, Xiangya Hospital, Central South University, Changsha 410008, Hunan, China.
Xiang ChenDepartment of Dermatology, Xiangya Hospital, Central South University, Changsha 410008, Hunan, China.
Cong PengDepartment of Dermatology, Xiangya Hospital, Central South University, Changsha 410008, Hunan, China.
MingYang GaoDepartment of Dermatology, The First Affiliated Hospital of Dalian Medical University, Dalian 116011, Liaoning, China.
Dalian Medical University · CNCentral South University · CNFirst Affiliated Hospital of Dalian Medical University · CNXiangya Hospital Central South University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Long-term exposure to arsenic has been linked to tumorigenesis in different organs and tissues, such as skin; however, the detailed mechanism remains unclear. In this present study, we integrated "omics" including microRNAome, proteomics and metabolomics to investigate the potential molecular mechanisms. Compared with non-malignant human keratinocytes (HaCaT), twenty-six miRNAs were significantly altered in arsenic-induced transformed cells. Among these miRNAs, the differential expression of six miRNAs was confirmed using Q-RT-PCR, representing potential oxidative stress genes. Two-dimensional gel electrophoresis (2D-PAGE) and mass spectrometry (MS) were performed to identify the differential expression of proteins in arsenic-induced transformed cells, and twelve proteins were significantly changed. Several proteins were associated with oxidative stress and carcinogenesis including heat shock protein beta-1 (HSPB1), peroxiredoxin-2 (PRDX2). Using ultra-performance liquid chromatography and Q-TOF mass spectrometry (UPLC/Q-TOF MS), 68 metabolites including glutathione, fumaric acid, citric acid, phenylalanine, and tyrosine, related to redox metabolism, glutathione metabolism, citrate cycle, met cycle, phenylalanine and tyrosine metabolism were identified and quantified. Taken together, these results indicated that arsenic-induced transformed cells exhibit alterations in miRNA, protein and metabolite profiles providing novel insights into arsenic-induced cell malignant transformation and identifying early potential biomarkers for cutaneous squamous cell carcinoma induced by arsenic.

Indexed as

arseniccutaneous squamous cell carcinomametabolomicsmicroRNAomeproteomics

Identifiers

PMID29207610
PMCPMC5710891
OpenAlexW2728815906

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.