Evidence map›Paper›PMID 29206475›Full record

ArticleAmerican journal of respiratory cell and molecular biology2018

Whole-Blood Gene Expression in Pulmonary Nontuberculous Mycobacterial Infection.

Steven A Cowman, Joseph Jacob, David M Hansell, Peter Kelleher, Robert Wilson, William O C Cookson, Miriam F Moffatt, Michael R Loebinger

Open access · greenAbstract read
In one paragraph

Article in American journal of respiratory cell and molecular biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 47 citations in OpenAlex.

  1. Frontiers in nutrition · 2026
    Trial
  2. Article
  3. Review
  4. Article
  5. Article
  6. An alveolus lung-on-a-chip model ofbioRxiv : the preprint server for biology · 2025
    Article
  7. Upregulation ofCanadian respiratory journal · 2025
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. The roles of neutrophils in non-tuberculous mycobacterial pulmonary disease.Annals of clinical microbiology and antimicrobials · 2023
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Review
  19. Article
  20. Pulmonary non-tuberculous mycobacterial infections: current state and future management.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2020
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Steven A Cowman1 National Heart and Lung Institute, Imperial College London, London, United Kingdom.
Joseph Jacob1 National Heart and Lung Institute, Imperial College London, London, United Kingdom.
David M Hansell1 National Heart and Lung Institute, Imperial College London, London, United Kingdom.
Peter Kelleher1 National Heart and Lung Institute, Imperial College London, London, United Kingdom.
Robert Wilson1 National Heart and Lung Institute, Imperial College London, London, United Kingdom.
William O C Cookson1 National Heart and Lung Institute, Imperial College London, London, United Kingdom.
Miriam F Moffatt1 National Heart and Lung Institute, Imperial College London, London, United Kingdom.
Michael R Loebinger1 National Heart and Lung Institute, Imperial College London, London, United Kingdom.
Lung Institute · USImperial College London · GBRoyal Brompton Hospital · GB

Funding

Wellcome Trust
6 · The paper itself

Abstract

The factors predisposing toward the development of pulmonary nontuberculous mycobacterial (pNTM) disease and influencing disease progression remain unclear. Impaired immune responses have been reported in individuals with pNTM disease, but data are limited and inconsistent. In this study, we sought to use gene expression profiling to examine the host response to pNTM disease. Microarray analysis of whole-blood gene expression was performed on 25 subjects with pNTM disease and 27 uninfected control subjects with respiratory disease. Gene expression results were compared with phenotypic variables and survival data. Compared with uninfected control subjects, pNTM disease was associated with downregulation of 213 transcripts enriched for terms related to T cell signaling, including IFNG. Reduced IFNG expression was associated with more severe computed tomography changes and impaired lung function. Mortality was associated with the expression of transcripts related to the innate immune response and inflammation, whereas transcripts related to T and B cell function were associated with improved survival. These findings suggest that pNTM disease is associated with an aberrant immune response, which may reflect an underlying propensity to infection or result from NTM infection itself. There were important differences in the immune response associated with survival and mortality in pNTM disease.

Indexed as

TranscriptomeAgedCase-Control StudiesFemaleGene Expression ProfilingGenetic MarkersGenetic Predisposition to DiseaseHost-Pathogen InteractionsHumansMaleMiddle AgedMycobacterium Infections, NontuberculousNontuberculous MycobacteriaOligonucleotide Array Sequence AnalysisPhenotypePrognosisGenetic Markersgene expression profilinginterferon-γnontuberculous mycobacteria

Identifiers

PMID29206475
PMCPMC5894497
OpenAlexW2772935677

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.