Evidence map›Paper›PMID 29206338›Full record

ArticleChembiochem : a European journal of chemical biology2018

Alphanumerical Visual Display Made of DNA Logic Gates for Drug Susceptibility Testing of Pathogens.

Ryan P Connelly, Evgeny S Morozkin, Yulia V Gerasimova

Open access · greenAbstract read
In one paragraph

Article in Chembiochem : a European journal of chemical biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Ryan P ConnellyChemistry Department, University of Central Florida, 4111 Libra Drive, Orlando, FL, 32816, USA.
Evgeny S MorozkinChemistry Department, University of Central Florida, 4111 Libra Drive, Orlando, FL, 32816, USA.
Yulia V GerasimovaChemistry Department, University of Central Florida, 4111 Libra Drive, Orlando, FL, 32816, USA.ORCID 0000-0001-8804-9770
University of Central Florida · US

Funding

Development of a method for visual detection of Mycobacterium tuberculosis complexR21AI123876 · NIAID · UNIVERSITY OF CENTRAL FLORIDA · PI GERASIMOVA, YULIA, ROHDE, KYLE H · 2017 to 2018
$383k
NIAID NIH HHS R21 AI123876
6 · The paper itself

Abstract

Molecular diagnostics of drug-resistant pathogens require the analysis of point mutations in bacterial or viral genomes, which is usually performed by trained professionals and/or by sophisticated computer algorithms. We have developed a DNA-based logic system that autonomously analyzes mutations found in the genome of Mycobacterium tuberculosis complex (MTC) bacteria and communicates the output to a human user as alphanumeric characters read by the naked eye. The five-gate system displays "O" ("no infection") for the absence of MTC infection and "P" or "F" for passing or failing a drug-susceptibility test, respectively.

Indexed as

Computers, MolecularAnti-Bacterial AgentsDNA, BacterialHumansLogicMicrobial Sensitivity TestsMycobacterium tuberculosisPathology, MolecularTuberculosisAnti-Bacterial AgentsDNA, BacterialdeoxyribozymesDNA logic gatesG-quadruplexesperoxidasesrifampin susceptibility

Identifiers

PMID29206338
PMCPMC5962014
OpenAlexW2775484610

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.