Evidence map›Paper›PMID 29205508›Full record

ArticleJournal of clinical laboratory analysis2018

Aberrant methylation of mutL homolog 1 is associated with increased risk of non-small cell lung cancer.

Haochang Hu, Xiaoying Chen, Cong Zhou, Bin Li, Yong Yang, Xiuru Ying, Yiyi Mao, Yihan Zhang, Jie Zhong, Jie Dai and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of clinical laboratory analysis, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 1 pooled it
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 1 synthesis or guideline pooled it, 6 citations in OpenAlex.

  1. Pooled it
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  3. Review
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 2 institutions in 1 country.

Haochang HuMedical Genetics Center, School of Medicine, Ningbo University, Ningbo, Zhejiang, China.
Xiaoying ChenDepartment of Medical Record, Women's Hospital, School of Medicine, Zhejiang University, Hangzhou, Zhejiang, China.
Cong ZhouMedical Genetics Center, School of Medicine, Ningbo University, Ningbo, Zhejiang, China.
Bin LiMedical Genetics Center, School of Medicine, Ningbo University, Ningbo, Zhejiang, China.
Yong YangMedical Genetics Center, School of Medicine, Ningbo University, Ningbo, Zhejiang, China.
Xiuru YingMedical Genetics Center, School of Medicine, Ningbo University, Ningbo, Zhejiang, China.
Yiyi MaoMedical Genetics Center, School of Medicine, Ningbo University, Ningbo, Zhejiang, China.
Yihan ZhangMedical Genetics Center, School of Medicine, Ningbo University, Ningbo, Zhejiang, China.
Jie ZhongMedical Genetics Center, School of Medicine, Ningbo University, Ningbo, Zhejiang, China.
Jie DaiMedical Genetics Center, School of Medicine, Ningbo University, Ningbo, Zhejiang, China.
Hang YuMedical Genetics Center, School of Medicine, Ningbo University, Ningbo, Zhejiang, China.
Boyi WuMedical Genetics Center, School of Medicine, Ningbo University, Ningbo, Zhejiang, China.
Xiaodong LiMedical Genetics Center, School of Medicine, Ningbo University, Ningbo, Zhejiang, China.
Tiangong WangMedical Genetics Center, School of Medicine, Ningbo University, Ningbo, Zhejiang, China.
Shiwei DuanMedical Genetics Center, School of Medicine, Ningbo University, Ningbo, Zhejiang, China.ORCID http://orcid.org/0000-0001-7682-2877
Ningbo University · CNWomen's Hospital, School of Medicine, Zhejiang University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundNon-small cell lung cancer (NSCLC) is a common malignant tumor. DNA hypermethylation in the promoter region has been served as a potential molecular marker for several tumors. The goal of the current study was to assess the diagnostic ability of mutL homolog 1 (MLH1) promoter methylation in NSCLC.

methodsA total of 111 NSCLC patients' paired tissue samples were obtained to explore the association between MLH1 promoter methylation and NSCLC by methylation-specific polymerase chain reaction (MSP) method. Public databases including The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO) were used to verify our findings.

resultsOur results showed a significantly higher MLH1 methylation frequency in tumor tissue samples than their paired adjacent tissues (P = .008). ROC curve indicated that MLH1MSP assay was a sensitive but not a specific method in the diagnosis for NSCLC (sensitivity = 0.964, specificity = 0.135, AUC = 0.550). And the association between the methylation level and clinical characteristics has no statistical significance. TCGA cohort evinced a higher methylation probability in tumor group compared with nontumor group (the mean β value: -0.449 [-0.467, -0.437] vs -0.466 [-0.472, -0.437], P = .011), which was consistent with our results. Meanwhile, an inverse correlation between MLH1 methylation and MLH1 expression was detected in TCGA and GEO databases.

conclusionsThe MSP method for MLH1 methylation was a sensitive but not a specific diagnostic method for NSCLC.

Indexed as

AdultAgedAged, 80 and overAge FactorsCarcinoma, Non-Small-Cell LungDatabases, GeneticDNA MethylationFemaleHumansLung NeoplasmsMaleMiddle AgedMutL Protein Homolog 1Retrospective StudiesStatistics as TopicMutL Protein Homolog 1diagnosisDNA methylationmethylation-specific polymerase chain reactionmutL homolog 1non-small cell lung cancer

Identifiers

PMID29205508
PMCPMC6816959
OpenAlexW2774248761

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.