Evidence map›Paper›PMID 29205154›Full record

ArticleeLife2017

Epigenetic profiling of growth plate chondrocytes sheds insight into regulatory genetic variation influencing height.

Michael Guo, Zun Liu, Jessie Willen, Cameron P Shaw, Daniel Richard, Evelyn Jagoda, Andrew C Doxey, Joel Hirschhorn, Terence D Capellini

Open access · goldAbstract read
In one paragraph

Article in eLife, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed, 2 pooled it
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 2 syntheses or guidelines pooled it, 42 citations in OpenAlex.

  1. Pooled it
  2. Meta-Analysis of Genomewide Association Studies Reveals Genetic Variants for Hip Bone Geometry.Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research · 2019
    Pooled it
  3. iScience · 2026
    Article
  4. Modular genetic architecture underlies human hand and foot evolution.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  5. Article
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  7. Association ofMolecular genetics and metabolism reports · 2024
    Article
  8. Review
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  19. Review
  20. Genetics of early growth traits.Human molecular genetics · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Michael Guo *Broad Institute of MIT and Harvard, Cambridge, United States.ORCID 0000-0002-1357-6389
Zun Liu *Department of Human Evolutionary Biology, Harvard University, Cambridge, United States.
Jessie Willen *Department of Human Evolutionary Biology, Harvard University, Cambridge, United States.
Cameron P ShawDepartment of Human Evolutionary Biology, Harvard University, Cambridge, United States.
Daniel RichardDepartment of Human Evolutionary Biology, Harvard University, Cambridge, United States.
Evelyn JagodaDepartment of Human Evolutionary Biology, Harvard University, Cambridge, United States.
Andrew C DoxeyDepartment of Biology, University of Waterloo, Waterloo, Canada.
Joel HirschhornBroad Institute of MIT and Harvard, Cambridge, United States.
Terence D CapelliniBroad Institute of MIT and Harvard, Cambridge, United States.ORCID 0000-0003-3842-8478
Harvard University · USBroad Institute · USUniversity of Waterloo · CA

Funding

Cell Interactions in the Inflamed Intestinal MucosaR01DK075787 · NIDDK · BOSTON CHILDREN'S HOSPITAL · PI JOEL N HIRSCHHORN · 2007 to 2026
$13.1M
NIDDK NIH HHS R01 DK075787
6 · The paper itself

Abstract

GWAS have identified hundreds of height-associated loci. However, determining causal mechanisms is challenging, especially since height-relevant tissues (e.g. growth plates) are difficult to study. To uncover mechanisms by which height GWAS variants function, we performed epigenetic profiling of murine femoral growth plates. The profiled open chromatin regions recapitulate known chondrocyte and skeletal biology, are enriched at height GWAS loci, particularly near differentially expressed growth plate genes, and enriched for binding motifs of transcription factors with roles in chondrocyte biology. At specific loci, our analyses identified compelling mechanisms for GWAS variants. For example, at

Indexed as

Body HeightEpigenesis, GeneticGenetic VariationAnimalsChondrocytesChromatinGenetic LociGrowth PlateHumansMiceChromatinATAC-seqChondrocyteEpigeneticsevolutionary biologygenomicsHeighthumanHumanhuman biologymedicinemouseMouse

Identifiers

PMID29205154
PMCPMC5716665
OpenAlexW2769685161

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.