Evidence map›Paper›PMID 29204753›Full record

ArticleJournal of plant research2018

Phloem differentiation: an integrative model for cell specification.

Bernhard Blob, Jung-Ok Heo, Yka Helariutta

Abstract read
In one paragraph

Article in Journal of plant research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Bernhard BlobSainsbury Laboratory, Cambridge University, Bateman Street, Cambridge, CB2 1LR, UK.
Jung-Ok HeoSainsbury Laboratory, Cambridge University, Bateman Street, Cambridge, CB2 1LR, UK.
Yka HelariuttaSainsbury Laboratory, Cambridge University, Bateman Street, Cambridge, CB2 1LR, UK. yrjo.helariutta@slcu.cam.ac.uk.

Funding

Biotechnology and Biological Sciences Research Council BB/N013158/1European Research Council 323052European Research Council Advanced Investigator Grant Symdev (No. 323052)Medical Research Council MR/M008975/1
6 · The paper itself

Abstract

Plant vasculature consists of two major conductive cell types, xylem tracheary elements and phloem sieve elements (SEs). Both cell types undergo a highly specialized differentiation process. The root meristem of Arabidopsis displays a stereotypical anatomy in which the central vasculature is surrounded by concentric layers of outer tissues. Each cell file is derived from stem cells located in the root tip. A series of formative and proliferative divisions take place in the meristem; these are followed by cell expansion and differentiation. Protophloem differentiation is unique in being complete only 20-25 cells away from the first stem cell, and during the differentiation process the cells lose several organelles, including the nucleus, while the remaining organelles are rearranged. Defects in SE development have been shown to result in impaired auxin transport and response and therefore systemically affect root growth. Although a few genes have been demonstrated to function in phloem development, detailed analyses and a comprehensive understanding of sieve element development (i.e. how often the stem cells divide, how frequently enucleation takes place, and how SE development is coordinated between cell division and differentiation on a molecular level) are still lacking. Advanced live-imaging techniques which enable prolonged time-lapse captures of root tip growth as well as single-cell transcriptomic analysis of the 20-25 cells in the SE file could help resolve these questions. In addition, understanding the interplay between the PLETHORA (PLT) gradient, which is known to govern the root zonation, and phloem development within the root meristem could shed light on the rapidity of SE differentiation and its importance to the meristem.

Indexed as

Cell DifferentiationGene Expression Regulation, PlantArabidopsisArabidopsis ProteinsMeristemModels, GeneticPhloemArabidopsis ProteinsAuxinPhloem sieve elementsPlethoraSingle-cell transcriptomics

Identifiers

PMID29204753
PMCPMC5762813

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.