Evidence map›Paper›PMID 29204714›Full record

ArticleWorld journal of microbiology & biotechnology2017

Comprehensive profiling of functional attributes, virulence potential and evolutionary dynamics in mycobacterial secretomes.

Ayan Roy, Arnab Sen, Sourav Chakraborty, Indrani Sarkar

Erratum issuedAbstract read
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In one paragraph

Article in World journal of microbiology & biotechnology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Ayan RoyBioinformatics Facility, Department of Botany, University of North Bengal, Siliguri, 734013, India.
Arnab SenBioinformatics Facility, Department of Botany, University of North Bengal, Siliguri, 734013, India.
Sourav ChakrabortyBioinformatics Facility, Department of Botany, University of North Bengal, Siliguri, 734013, India.
Indrani SarkarBioinformatics Facility, Department of Botany, University of North Bengal, Siliguri, 734013, India. indrani.sarkar89@gmail.com.
North Bengal University · IN

Funding

Department of Biotechnology, Govt. of West Bengal, India Project No. 206/BT-Estt./RD-22/2014
6 · The paper itself

Abstract

Mycobacterium is an interesting genus which not only includes intimidating pathogens, associated with severe devastations globally, but also comprises of non-pathogenic eco-friendly members that detoxify environmental pollutants. Secretory proteins of the mycobacterial communities are essential components which are firmly believed to facilitate proper cross-talk and apt communication with host cellular surroundings and environmental niche. Secretory elements also play vital roles in mycobacterial pathogenesis. In the present endeavor, an extensive profiling of mycobacterial secretomes, considering both pathogenic and non-pathogenic members, has been executed. Thorough analysis on amino acid composition and functional behavior of the mycobacterial secretory proteins has also been performed. In-depth scrutiny of biosynthetic cost of the secretory proteins with respect to the non-secretory ones indicated that the genus Mycobacterium strictly follows the policy of cost-minimization among the sets of imperative secretory proteins. Comprehensive assessment of potential virulence among the key secretory components signified that the pathogenic mycobacterial members possess a larger share of potentially virulent secretory elements in comparison to their non-pathogenic counterparts. Present analysis also revealed contrasted evolutionary features of the secretomes wherein secretory proteins were found to evolve faster than non-secretory proteins in mycobacterial pathogens but not in the concerned non-pathogens. Outcomes of present investigation promise to provide novel insights into the enigma of mycobacterial pathogenesis, bioremediation and adaptation in diverse niche and aid further scientific investigations associated with concerned research area.

Indexed as

Adaptation, BiologicalAmino AcidsBacterial ProteinsBiodegradation, EnvironmentalEvolution, MolecularGene Expression ProfilingGenome, BacterialMultilocus Sequence TypingMycobacteriumPhylogenyProteomeProteomicsVirulenceAmino AcidsBacterial ProteinsProteomeEvolutionMycobacteriumPotentially virulent secretory proteinsProtein biosynthetic costSecretomes

Identifiers

PMID29204714
OpenAlexW2771386699

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.