Evidence map›Paper›PMID 29203920›Full record

ArticleNature ecology & evolution2018

Pan-arthropod analysis reveals somatic piRNAs as an ancestral defence against transposable elements.

Samuel H Lewis, Kaycee A Quarles, Yujing Yang, Melanie Tanguy, Lise Frézal, Stephen A Smith, Prashant P Sharma, Richard Cordaux, Clément Gilbert, Isabelle Giraud and 5 more

Abstract read
In one paragraph

Article in Nature ecology & evolution, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 171 papers.

0numbers the graph read from it
0cells of the map it votes in
171citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

171 citing papers in PubMed.

  1. Article
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  4. Lifestyles ofProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  5. Article
  6. Review
  7. Divergent Evolutionary Profile ofAnimals : an open access journal from MDPI · 2026
    Article
  8. Article
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  11. Review
  12. Review
  13. Article
  14. Article
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  17. Article
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  20. Article

111 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Samuel H LewisDepartment of Genetics, University of Cambridge, Downing Street, Cambridge, CB2 3EH, UK. sam.lewis@gen.cam.ac.uk.ORCID http://orcid.org/0000-0001-8967-6661
Kaycee A QuarlesHoward Hughes Medical Institute, RNA Therapeutics Institute, University of Massachusetts Medical School, 368 Plantation Street, Worcester, MA, 01605, USA.
Yujing YangHoward Hughes Medical Institute, RNA Therapeutics Institute, University of Massachusetts Medical School, 368 Plantation Street, Worcester, MA, 01605, USA.
Melanie TanguyDepartment of Genetics, University of Cambridge, Downing Street, Cambridge, CB2 3EH, UK.
Lise FrézalDepartment of Genetics, University of Cambridge, Downing Street, Cambridge, CB2 3EH, UK.
Stephen A SmithDepartment of Biomedical Sciences and Pathobiology, Virginia Maryland College of Veterinary Medicine, 205 Duck Pond Drive, Virginia Tech, Blacksburg, VA, 24061, USA.
Prashant P SharmaDepartment of Zoology, University of Wisconsin-Madison, 352 Birge Hall, 430 Lincoln Drive, Madison, WI, 53706, USA.
Richard CordauxUniversité de Poitiers, Laboratoire Ecologie et Biologie des Interactions, Equipe Ecologie Evolution Symbiose, 5 Rue Albert Turpain, TSA 51106, 86073, Poitiers Cedex 9, France.
Clément GilbertUniversité de Poitiers, Laboratoire Ecologie et Biologie des Interactions, Equipe Ecologie Evolution Symbiose, 5 Rue Albert Turpain, TSA 51106, 86073, Poitiers Cedex 9, France.
Isabelle GiraudUniversité de Poitiers, Laboratoire Ecologie et Biologie des Interactions, Equipe Ecologie Evolution Symbiose, 5 Rue Albert Turpain, TSA 51106, 86073, Poitiers Cedex 9, France.
David H CollinsSchool of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich, NR4 7TJ, UK.
Phillip D ZamoreHoward Hughes Medical Institute, RNA Therapeutics Institute, University of Massachusetts Medical School, 368 Plantation Street, Worcester, MA, 01605, USA.
Eric A MiskaDepartment of Genetics, University of Cambridge, Downing Street, Cambridge, CB2 3EH, UK.ORCID http://orcid.org/0000-0002-4450-576X
Peter SarkiesMedical Research Council London Institute of Medical Sciences, Du Cane Road, London, W12 0NN, UK.
Francis M JigginsDepartment of Genetics, University of Cambridge, Downing Street, Cambridge, CB2 3EH, UK. fmj1001@cam.ac.uk.ORCID http://orcid.org/0000-0001-7470-8157

Funding

Understanding the Mechanism of RNA InterferenceR37GM062862 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI ZAMORE, PHILLIP D · 2010 to 2019
$5.3M
Understanding the Mechanism of RNA Interference (RNAi)R01GM062862 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI ZAMORE, PHILLIP D · 2001 to 2009
$3.2M
Cancer Research UK 11832Cancer Research UK 18583European Research Council 281668Medical Research Council MC_UP_1102/13NIGMS NIH HHS R01 GM062862NIGMS NIH HHS R37 GM062862Wellcome Trust
6 · The paper itself

Abstract

In animals, small RNA molecules termed PIWI-interacting RNAs (piRNAs) silence transposable elements (TEs), protecting the germline from genomic instability and mutation. piRNAs have been detected in the soma in a few animals, but these are believed to be specific adaptations of individual species. Here, we report that somatic piRNAs were probably present in the ancestral arthropod more than 500 million years ago. Analysis of 20 species across the arthropod phylum suggests that somatic piRNAs targeting TEs and messenger RNAs are common among arthropods. The presence of an RNA-dependent RNA polymerase in chelicerates (horseshoe crabs, spiders and scorpions) suggests that arthropods originally used a plant-like RNA interference mechanism to silence TEs. Our results call into question the view that the ancestral role of the piRNA pathway was to protect the germline and demonstrate that small RNA silencing pathways have been repurposed for both somatic and germline functions throughout arthropod evolution.

Indexed as

Evolution, MolecularAnimalsArthropodsDNA Transposable ElementsRNA, MessengerRNA, Small InterferingDNA Transposable ElementsRNA, MessengerRNA, Small Interfering

Identifiers

PMID29203920
PMCPMC5732027

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.