Evidence map›Paper›PMID 29203770›Full record

ArticleNature communications2017

The transcript cleavage factor paralogue TFS4 is a potent RNA polymerase inhibitor.

Thomas Fouqueau, Fabian Blombach, Ross Hartman, Alan C M Cheung, Mark J Young, Finn Werner

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Archaeal transcription.Transcription · 2020
    Review
  7. Article
  8. The Role of Archaeal Chromatin in Transcription.Journal of molecular biology · 2019
    Review
  9. Article
  10. The cutting edge of archaeal transcription.Emerging topics in life sciences · 2018
    Article
  11. Article
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Thomas FouqueauInstitute of Structural & Molecular Biology, Division of Biosciences, University College London, London, WC1E 6BT, UK.ORCID http://orcid.org/0000-0003-1539-093X
Fabian BlombachInstitute of Structural & Molecular Biology, Division of Biosciences, University College London, London, WC1E 6BT, UK.ORCID http://orcid.org/0000-0001-5337-8662
Ross HartmanDepartment of Microbiology, Montana State University, 173520, Bozeman, MT, MT 59717, USA.
Alan C M CheungInstitute of Structural & Molecular Biology, Division of Biosciences, University College London, London, WC1E 6BT, UK.ORCID http://orcid.org/0000-0001-6430-5127
Mark J YoungDepartment of Microbiology, Montana State University, 173520, Bozeman, MT, MT 59717, USA.
Finn WernerInstitute of Structural & Molecular Biology, Division of Biosciences, University College London, London, WC1E 6BT, UK. f.werner@ucl.ac.uk.
Institute of Structural and Molecular Biology · GBMontana State University · US

Funding

Wellcome Trust 079351/Z/06/Z
6 · The paper itself

Abstract

TFIIS-like transcript cleavage factors enhance the processivity and fidelity of archaeal and eukaryotic RNA polymerases. Sulfolobus solfataricus TFS1 functions as a bona fide cleavage factor, while the paralogous TFS4 evolved into a potent RNA polymerase inhibitor. TFS4 destabilises the TBP-TFB-RNAP pre-initiation complex and inhibits transcription initiation and elongation. All inhibitory activities are dependent on three lysine residues at the tip of the C-terminal zinc ribbon of TFS4; the inhibition likely involves an allosteric component and is mitigated by the basal transcription factor TFEα/β. A chimeric variant of yeast TFIIS and TFS4 inhibits RNAPII transcription, suggesting that the molecular basis of inhibition is conserved between archaea and eukaryotes. TFS4 expression in S. solfataricus is induced in response to infection with the S ulfolobus turreted icosahedral virus. Our results reveal a compelling functional diversification of cleavage factors in archaea, and provide novel insights into transcription inhibition in the context of the host-virus relationship.

Indexed as

Carrier ProteinsIntracellular Signaling Peptides and ProteinsmRNA Cleavage and Polyadenylation FactorsRNA Polymerase IISaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSulfolobus solfataricusTranscription FactorsTranscription Factors, TFIITranscription Factor TFIIBTranscription, GeneticCarrier ProteinsIntracellular Signaling Peptides and ProteinsmRNA Cleavage and Polyadenylation FactorsRNA Polymerase IISaccharomyces cerevisiae ProteinsSUA7 protein, S cerevisiaeTfs1 protein, S cerevisiaeTranscription FactorsTranscription Factors, TFIITranscription Factor TFIIBtranscription factor TFIIE

Identifiers

PMID29203770
PMCPMC5715097
OpenAlexW2771041537

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.