Evidence map›Paper›PMID 29202709›Full record

ArticleBMC plant biology2017

Transcriptomic and metabolic responses of Calotropis procera to salt and drought stress.

Mohammed Z Mutwakil, Nahid H Hajrah, Ahmed Atef, Sherif Edris, Mernan J Sabir, Areej K Al-Ghamdi, Meshaal J S M Sabir, Charlotte Nelson, Rania M Makki, Hani M Ali and 8 more

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.3field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 40 citations in OpenAlex.

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  8. Comparative Transcriptomics Analysis of Roots and Leaves under Cd Stress inInternational journal of molecular sciences · 2022
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  11. Salt tolerance ofPhysiology and molecular biology of plants : an international journal of functional plant biology · 2021
    Article
  12. An Overview of the Characteristics and Potential ofFrontiers in plant science · 2021
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Strengthening desert plant biotechnology research in the United Arab Emirates: a viewpoint.Physiology and molecular biology of plants : an international journal of functional plant biology · 2018
    Review
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 4 institutions in 4 countries.

Mohammed Z MutwakilBiotechnology Research Group, Department of Biological Sciences, Faculty of Science, King Abdulaziz University (KAU), P.O. Box 80141, Jeddah, 21589, Saudi Arabia.
Nahid H HajrahBiotechnology Research Group, Department of Biological Sciences, Faculty of Science, King Abdulaziz University (KAU), P.O. Box 80141, Jeddah, 21589, Saudi Arabia.
Ahmed AtefBiotechnology Research Group, Department of Biological Sciences, Faculty of Science, King Abdulaziz University (KAU), P.O. Box 80141, Jeddah, 21589, Saudi Arabia.
Sherif EdrisBiotechnology Research Group, Department of Biological Sciences, Faculty of Science, King Abdulaziz University (KAU), P.O. Box 80141, Jeddah, 21589, Saudi Arabia.
Mernan J SabirBiotechnology Research Group, Department of Biological Sciences, Faculty of Science, King Abdulaziz University (KAU), P.O. Box 80141, Jeddah, 21589, Saudi Arabia.
Areej K Al-GhamdiBiotechnology Research Group, Department of Biological Sciences, Faculty of Science, King Abdulaziz University (KAU), P.O. Box 80141, Jeddah, 21589, Saudi Arabia.
Meshaal J S M SabirBiotechnology Research Group, Department of Biological Sciences, Faculty of Science, King Abdulaziz University (KAU), P.O. Box 80141, Jeddah, 21589, Saudi Arabia.
Charlotte NelsonCentre for Genomic Research, The University of Liverpool, Liverpool, L170AH, UK.
Rania M MakkiBiotechnology Research Group, Department of Biological Sciences, Faculty of Science, King Abdulaziz University (KAU), P.O. Box 80141, Jeddah, 21589, Saudi Arabia.
Hani M AliBiotechnology Research Group, Department of Biological Sciences, Faculty of Science, King Abdulaziz University (KAU), P.O. Box 80141, Jeddah, 21589, Saudi Arabia.
Fotouh M El-DomyatiDepartment of Genetics, Faculty of Agriculture, Ain Shams University, Cairo, Egypt.
Abdulrahman S M Al-HajarBiotechnology Research Group, Department of Biological Sciences, Faculty of Science, King Abdulaziz University (KAU), P.O. Box 80141, Jeddah, 21589, Saudi Arabia.
Yoann GloaguenCollege of MVLS, Glasgow Polyomics, University of Glasgow, Glasgow, UK.
Hassan S Al-ZahraniBiotechnology Research Group, Department of Biological Sciences, Faculty of Science, King Abdulaziz University (KAU), P.O. Box 80141, Jeddah, 21589, Saudi Arabia.
Jamal S M SabirBiotechnology Research Group, Department of Biological Sciences, Faculty of Science, King Abdulaziz University (KAU), P.O. Box 80141, Jeddah, 21589, Saudi Arabia.
Robert K JansenBiotechnology Research Group, Department of Biological Sciences, Faculty of Science, King Abdulaziz University (KAU), P.O. Box 80141, Jeddah, 21589, Saudi Arabia.
Ahmed BahieldinBiotechnology Research Group, Department of Biological Sciences, Faculty of Science, King Abdulaziz University (KAU), P.O. Box 80141, Jeddah, 21589, Saudi Arabia.
Neil HallBiotechnology Research Group, Department of Biological Sciences, Faculty of Science, King Abdulaziz University (KAU), P.O. Box 80141, Jeddah, 21589, Saudi Arabia. Neil.Hall@earlham.ac.uk.ORCID http://orcid.org/0000-0003-2808-0009
King Abdulaziz University · SAAin Shams University · EGUniversity of Glasgow · GBUniversity of Liverpool · GB

Funding

King Abdulaziz City for Science and Technology T-35-9Medical Research Council G0900753Medical Research Council MR/K002279/1
6 · The paper itself

Abstract

backgroundCalotropis procera is a wild plant species in the family Apocynaceae that is able to grow in harsh, arid and heat stressed conditions. Understanding how this highly adapted plant persists in harsh environments should inform future efforts to improve the hardiness of crop and forage plant species. To study the plant response to droμght and osmotic stress, we treated plants with polyethylene glycol and NaCl and carried out transcriptomic and metabolomics measurements across a time-course of five days.

resultsWe identified a highly dynamic transcriptional response across the time-course including dramatic changes in inositol signaling, stress response genes and cytokinins. The resulting metabolome changes also involved sharp increases of myo-inositol, a key signaling molecule and elevated amino acid metabolites at later times.

conclusionsThe data generated here provide a first glimpse at the expressed genome of C. procera, a plant that is exceptionally well adapted to arid environments. We demonstrate, through transcriptome and metabolome analysis that myo-inositol signaling is strongly induced in response to drought and salt stress and that there is elevation of amino acid concentrations after prolonged osmotic stress. This work should lay the foundations of future studies in adaptation to arid environments.

Indexed as

CalotropisGenes, PlantMetabolomeOxidative StressStress, PhysiologicalTranscriptomeDrought stressMetabolomicsMyo-inositolSalt stressTranscriptomics

Identifiers

PMID29202709
PMCPMC5716246
OpenAlexW2772271135

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.