Evidence map›Paper›PMID 29202477›Full record

ArticleThe Journal of clinical investigation2018

CRISPR-Cas9 screen reveals a MYCN-amplified neuroblastoma dependency on EZH2.

Liying Chen, Gabriela Alexe, Neekesh V Dharia, Linda Ross, Amanda Balboni Iniguez, Amy Saur Conway, Emily Jue Wang, Veronica Veschi, Norris Lam, Jun Qi and 23 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 112 papers.

0numbers the graph read from it
0cells of the map it votes in
112citing papers in PubMed
9.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

112 citing papers in PubMed, 156 citations in OpenAlex.

  1. Review
  2. Article
  3. Targeting MYC-Driven Cancers: From Oncogenic Addiction to Therapeutic Vulnerability.BioDrugs : clinical immunotherapeutics, biopharmaceuticals and gene therapy · 2026
    Review
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  15. SGSS05-NS3, a covalent SETD8 inhibitor that activates p53 pathway in neuroblastoma.Journal of experimental & clinical cancer research : CR · 2025
    Article
  16. Article
  17. Article
  18. Review
  19. Review
  20. Review

52 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

33 authors at 7 institutions in 1 country.

Liying ChenDepartment of Pediatric Oncology, Dana-Farber Cancer Institute and Boston Children's Hospital, Boston, Massachusetts, USA.
Gabriela AlexeDepartment of Pediatric Oncology, Dana-Farber Cancer Institute and Boston Children's Hospital, Boston, Massachusetts, USA.
Neekesh V DhariaDepartment of Pediatric Oncology, Dana-Farber Cancer Institute and Boston Children's Hospital, Boston, Massachusetts, USA.
Linda RossDepartment of Pediatric Oncology, Dana-Farber Cancer Institute and Boston Children's Hospital, Boston, Massachusetts, USA.
Amanda Balboni IniguezDepartment of Pediatric Oncology, Dana-Farber Cancer Institute and Boston Children's Hospital, Boston, Massachusetts, USA.
Amy Saur ConwayDepartment of Pediatric Oncology, Dana-Farber Cancer Institute and Boston Children's Hospital, Boston, Massachusetts, USA.
Emily Jue WangDepartment of Pediatric Oncology, Dana-Farber Cancer Institute and Boston Children's Hospital, Boston, Massachusetts, USA.
Veronica VeschiCell and Molecular Biology Section, Pediatric Oncology Branch, Center for Cancer Research, National Cancer Institute, NIH, Bethesda, Maryland, USA.
Norris LamCell and Molecular Biology Section, Pediatric Oncology Branch, Center for Cancer Research, National Cancer Institute, NIH, Bethesda, Maryland, USA.
Jun QiDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts, USA.
W Clay GustafsonDepartment of Pediatrics, Helen Diller Family Comprehensive Cancer Center, UCSF, San Francisco, California, USA.
Nicole NasholmDepartment of Pediatrics, Helen Diller Family Comprehensive Cancer Center, UCSF, San Francisco, California, USA.
Francisca VazquezBroad Institute, Cambridge, Massachusetts, USA.
Barbara A WeirBroad Institute, Cambridge, Massachusetts, USA.
Glenn S CowleyBroad Institute, Cambridge, Massachusetts, USA.
Levi D AliBroad Institute, Cambridge, Massachusetts, USA.
Sasha PantelBroad Institute, Cambridge, Massachusetts, USA.
Guozhi JiangBroad Institute, Cambridge, Massachusetts, USA.
William F HarringtonBroad Institute, Cambridge, Massachusetts, USA.
Yenarae LeeBroad Institute, Cambridge, Massachusetts, USA.
Amy GoodaleBroad Institute, Cambridge, Massachusetts, USA.
Rakela LubonjaBroad Institute, Cambridge, Massachusetts, USA.
John M Krill-BurgerBroad Institute, Cambridge, Massachusetts, USA.
Robin M MeyersBroad Institute, Cambridge, Massachusetts, USA.
Aviad TsherniakBroad Institute, Cambridge, Massachusetts, USA.
David E RootBroad Institute, Cambridge, Massachusetts, USA.
James E BradnerHarvard Medical School, Boston, Massachusetts, USA.
Todd R GolubDepartment of Pediatric Oncology, Dana-Farber Cancer Institute and Boston Children's Hospital, Boston, Massachusetts, USA.
Charles Wm RobertsDepartment of Pediatric Oncology, Dana-Farber Cancer Institute and Boston Children's Hospital, Boston, Massachusetts, USA.
William C HahnBroad Institute, Cambridge, Massachusetts, USA.
William A WeissDepartment of Pediatrics, Helen Diller Family Comprehensive Cancer Center, UCSF, San Francisco, California, USA.
Carol J ThieleCell and Molecular Biology Section, Pediatric Oncology Branch, Center for Cancer Research, National Cancer Institute, NIH, Bethesda, Maryland, USA.
Kimberly StegmaierDepartment of Pediatric Oncology, Dana-Farber Cancer Institute and Boston Children's Hospital, Boston, Massachusetts, USA.
Broad Institute · USBoston Children's Hospital · USNational Cancer Institute · USUCSF Helen Diller Family Comprehensive Cancer Center · USDana-Farber Cancer Institute · USHarvard University · USNeurological Surgery · US

Funding

Regulation of Differentiation of Pediatric Embryonal Tumors- NeuroblastomaZIABC010788 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI THIELE, CAROL J · 2009 to 2025
$29.7M
Tumor microenvironment-dependent therapy resistanceP01CA217959 · NCI · CHILDREN'S HOSP OF PHILADELPHIA · PI Kimberly Stegmaier · 2017 to 2026
$20.7M
Project 3: Humoral Targets and B Cell Biology in Chronic Graft-vs.-Host DiseaseP01CA142106 · NCI · DANA-FARBER CANCER INST · PI CUTLER, COREY S · 2009 to 2019
$17.5M
Research Training in Pediatric OncologyT32CA136432 · NCI · DANA-FARBER CANCER INST · PI SCOTT A ARMSTRONG · 2009 to 2026
$7.9M
The Dana-Farber Cancer Institute Cancer Target Discovery and Development CenterU01CA176058 · NCI · DANA-FARBER CANCER INST · PI HAHN, WILLIAM C. · 2013 to 2021
$7.8M
Systematic identification of oncogenic KRAS synthetic lethal interactionsU01CA199253 · NCI · BROAD INSTITUTE, INC. · PI HAHN, WILLIAM C. · 2015 to 2019
$3.7M
Targeting BET-bromodomains in neuroblastomaR01NS088355 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI STEGMAIER, KIMBERLY, WEISS, WILLIAM A · 2015 to 2019
$3.3M
NCI NIH HHS P01 CA142106NCI NIH HHS P01 CA217959NCI NIH HHS T32 CA136432NCI NIH HHS U01 CA176058NCI NIH HHS U01 CA199253NINDS NIH HHS R01 NS088355
6 · The paper itself

Abstract

Pharmacologically difficult targets, such as MYC transcription factors, represent a major challenge in cancer therapy. For the childhood cancer neuroblastoma, amplification of the oncogene MYCN is associated with high-risk disease and poor prognosis. Here, we deployed genome-scale CRISPR-Cas9 screening of MYCN-amplified neuroblastoma and found a preferential dependency on genes encoding the polycomb repressive complex 2 (PRC2) components EZH2, EED, and SUZ12. Genetic and pharmacological suppression of EZH2 inhibited neuroblastoma growth in vitro and in vivo. Moreover, compared with neuroblastomas without MYCN amplification, MYCN-amplified neuroblastomas expressed higher levels of EZH2. ChIP analysis showed that MYCN binds at the EZH2 promoter, thereby directly driving expression. Transcriptomic and epigenetic analysis, as well as genetic rescue experiments, revealed that EZH2 represses neuronal differentiation in neuroblastoma in a PRC2-dependent manner. Moreover, MYCN-amplified and high-risk primary tumors from patients with neuroblastoma exhibited strong repression of EZH2-regulated genes. Additionally, overexpression of IGFBP3, a direct EZH2 target, suppressed neuroblastoma growth in vitro and in vivo. We further observed strong synergy between histone deacetylase inhibitors and EZH2 inhibitors. Together, these observations demonstrate that MYCN upregulates EZH2, leading to inactivation of a tumor suppressor program in neuroblastoma, and support testing EZH2 inhibitors in patients with MYCN-amplified neuroblastoma.

Indexed as

Cell DifferentiationCRISPR-Cas SystemsEnhancer of Zeste Homolog 2 ProteinGene AmplificationGene Expression Regulation, NeoplasticNeuroblastomaN-Myc Proto-Oncogene ProteinUp-RegulationCell Line, TumorHumansNeuronsEnhancer of Zeste Homolog 2 ProteinEZH2 protein, humanMYCN protein, humanN-Myc Proto-Oncogene ProteinEpigeneticsOncology

Identifiers

PMID29202477
PMCPMC5749506
OpenAlexW2774087343

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.