Evidence map›Paper›PMID 29199986›Full record

ArticleActa crystallographica. Section F, Structural biology communications2017

A low-cost method for visible fluorescence imaging.

Crissy L Tarver, Marc Pusey

Open access · hybridAbstract read
In one paragraph

Article in Acta crystallographica. Section F, Structural biology communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Inexpensive robotic system for standard and fluorescent imaging of protein crystals.Acta crystallographica. Section F, Structural biology communications · 2019
    Article
  4. An inexpensive system for imaging the contents of multi-well plates.Acta crystallographica. Section F, Structural biology communications · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Crissy L TarverDepartment of Biological Science, University of Alabama in Huntsville, Huntsville, AL 35899, USA.
Marc PuseyDepartment of Biological Science, University of Alabama in Huntsville, Huntsville, AL 35899, USA.
University of Alabama in Huntsville · US

Funding

Macromolecule Crystallization Screening Results AnalysisR42GM116283 · NIGMS · IXPRESSGENES, INC. · PI PUSEY, MARC LEE · 2016 to 2017
$958k
Macromolecule Crystallization Screening Results AnalysisR41GM116283 · NIGMS · IXPRESSGENES, INC. · PI PUSEY, MARC LEE · 2015 to 2015
$150k
National Institutes of Health, National Institute of General Medical Sciences GM116283NIGMS NIH HHS R41 GM116283NIGMS NIH HHS R42 GM116283
6 · The paper itself

Abstract

A wide variety of crystallization solutions are screened to establish conditions that promote the growth of a diffraction-quality crystal. Screening these conditions requires the assessment of many crystallization plates for the presence of crystals. Automated systems for screening and imaging are very expensive. A simple approach to imaging trace fluorescently labeled protein crystals in crystallization plates has been devised, and can be implemented at a cost as low as $50. The proteins β-lactoglobulin B, trypsin and purified concanavalin A (ConA) were trace fluorescently labeled using three different fluorescent probes: Cascade Yellow (CY), Carboxyrhodamine 6G (CR) and Pacific Blue (PB). A crystallization screening plate was set up using β-lactoglobulin B labeled with CR, trypsin labeled with CY, ConA labeled with each probe, and a mixture consisting of 50% PB-labeled ConA and 50% CR-labeled ConA. The wells of these plates were imaged using a commercially available macro-imaging lens attachment for smart devices that have a camera. Several types of macro lens attachments were tested with smartphones and tablets. Images with the highest quality were obtained with an iPhone 6S and an AUKEY Ora 10× macro lens. Depending upon the fluorescent probe employed and its Stokes shift, a light-emitting diode or a laser diode was used for excitation. An emission filter was used for the imaging of protein crystals labeled with CR and crystals with two-color fluorescence. This approach can also be used with microscopy systems commonly used to observe crystallization plates.

Indexed as

ColorConcanavalin ACosts and Cost AnalysisCrystallizationEquipment DesignFluorescenceFluorescent DyesLactoglobulinsMolecular ImagingProteinsRhodaminesSmartphone6-carboxyrhodamine-6GConcanavalin AFluorescent DyesLactoglobulinsProteinsRhodaminesfluorescencelow-cost imagingprotein crystallizationtrace fluorescent labeling

Identifiers

PMID29199986
PMCPMC5713670
OpenAlexW2767482136

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.