Evidence map›Paper›PMID 29197384›Full record

ArticleBMC urology2017

Involvement of the bone morphogenic protein/SMAD signaling pathway in the etiology of congenital anomalies of the kidney and urinary tract accompanied by cryptorchidism.

Kentaro Mizuno, Akihiro Nakane, Hidenori Nishio, Yoshinobu Moritoki, Hideyuki Kamisawa, Satoshi Kurokawa, Taiki Kato, Ryosuke Ando, Tetsuji Maruyama, Takahiro Yasui and 1 more

Open access · goldAbstract readCase Reports
In one paragraph

Article in BMC urology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.1field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Kentaro MizunoDepartment of Nephro-urology, Nagoya City University Graduate School of Medical Sciences, Nagoya, Japan.
Akihiro NakaneDepartment of Nephro-urology, Nagoya City University Graduate School of Medical Sciences, Nagoya, Japan.
Hidenori NishioDepartment of Nephro-urology, Nagoya City University Graduate School of Medical Sciences, Nagoya, Japan.
Yoshinobu MoritokiDepartment of Nephro-urology, Nagoya City University Graduate School of Medical Sciences, Nagoya, Japan.
Hideyuki KamisawaDepartment of Nephro-urology, Nagoya City University Graduate School of Medical Sciences, Nagoya, Japan.
Satoshi KurokawaDepartment of Nephro-urology, Nagoya City University Graduate School of Medical Sciences, Nagoya, Japan.
Taiki KatoDepartment of Nephro-urology, Nagoya City University Graduate School of Medical Sciences, Nagoya, Japan.
Ryosuke AndoDepartment of Nephro-urology, Nagoya City University Graduate School of Medical Sciences, Nagoya, Japan.
Tetsuji MaruyamaDepartment of Nephro-urology, Nagoya City University Graduate School of Medical Sciences, Nagoya, Japan.
Takahiro YasuiDepartment of Nephro-urology, Nagoya City University Graduate School of Medical Sciences, Nagoya, Japan.
Yutaro HayashiDepartment of Pediatric urology, Nagoya City University Graduate School of Medical Sciences, 1 Kawasumi, Mizuho-cho, Mizuho-ku, Nagoya, Japan. yutaro@med.nagoya-cu.ac.jp.
Nagoya City University · JPMizuho (Japan) · JP

Funding

JSPS KAKENHI 26462421
6 · The paper itself

Abstract

backgroundCongenital anomalies of the kidney and urinary tract (CAKUT), such as renal dysplasia, hydronephrosis, or vesicoureteral reflux, are the most common causes of end-stage renal disease. However, the genetic etiology of CAKUT remains unclear. In this study, we performed whole exome sequencing (WES) to elucidate the genetic etiology of symptomatic CAKUT and CAKUT accompanied by cryptorchidism.

methodsThree patients with unilateral renal dysplasia accompanied by ipsilateral cryptorchidism were included in this analysis. Genomic DNA was extracted from peripheral blood, and WES was performed. Disease-specific single nucleotide polymorphisms (SNPs) were determined by comparison with the human genome reference sequence (hg19). Additionally, we searched for SNPs that were common to all three patients, with a particular focus on the coding regions of the target genes.

resultsIn total, 8710 SNPs were detected. Of the genes harboring these SNPs, 32 associated with renal or testicular development were selected for further analyses. Of these, eight genes (i.e., SMAD4, ITGA8, GRIP1, FREM1, FREM2, TNXB, BMP8B, and SALL1) carried a single amino acid substitution that was common to all three patients. In particular, SNPs in SMAD4 (His290Pro and His291Pro) have not been reported previously in patients with symptomatic CAKUT. Of the candidate genes, four genes (i.e., ITGA8, GRIP1, FREM1, and FREM2) were Fraser syndrome-related genes, encoding proteins that functionally converged on the glial cell-derived neurotrophic factor/RET/bone morphogenic protein (BMP) signaling pathways. As another candidate gene, the protein encoded by BMP8B activates the nuclear translocation of SMAD4, which regulates the expression of genes associated with the differentiation of primordial germ cells or testicular development. Additionally, BMP4, a member of the BMP family, regulates the interaction between metanephric mesenchyme and ureteric buds by suppressing GDNF.

conclusionsTaken together, our findings suggested that the development of the kidney and urinary tract is intimately linked with that of male reproductive organs via BMP/SMAD signaling pathways.

Indexed as

AdultBone Morphogenetic ProteinsChild, PreschoolCryptorchidismHumansInfantKidneyMalePolymorphism, Single NucleotideSignal TransductionSmad ProteinsUrinary TractBone Morphogenetic ProteinsSmad ProteinsCongenital anomalies of the kidney and urinary tractCryptorchidismExome sequencingRenal development

Identifiers

PMID29197384
PMCPMC5712187
OpenAlexW2772993082

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.