Evidence map›Paper›PMID 29197352›Full record

ArticleBMC medical genetics2017

Whole exome sequencing identifies TRIOBP pathogenic variants as a cause of post-lingual bilateral moderate-to-severe sensorineural hearing loss.

Agnieszka Pollak, Urszula Lechowicz, Victor Abel Murcia Pieńkowski, Piotr Stawiński, Joanna Kosińska, Henryk Skarżyński, Monika Ołdak, Rafał Płoski

Open access · goldAbstract read
In one paragraph

Article in BMC medical genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 1 pooled it
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 1 synthesis or guideline pooled it, 21 citations in OpenAlex.

  1. Pooled it
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  6. Alternative splicing in shaping the molecular landscape of the cochlea.Frontiers in cell and developmental biology · 2023
    Review
  7. Unbalanced bidirectional radial stiffness gradients within the organ of Corti promoted by TRIOBP.Proceedings of the National Academy of Sciences of the United States of America · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Agnieszka PollakDepartment of Genetics, Institute of Physiology and Pathology of Hearing, Mochnackiego 10, Warsaw, 02-042, Poland.ORCID 0000-0002-2847-1782
Urszula LechowiczDepartment of Genetics, Institute of Physiology and Pathology of Hearing, Mochnackiego 10, Warsaw, 02-042, Poland.
Victor Abel Murcia PieńkowskiDepartment of Medical Genetics, Warsaw Medical University, Pawinskiego 3c, Warsaw, 02-106, Poland.
Piotr StawińskiDepartment of Genetics, Institute of Physiology and Pathology of Hearing, Mochnackiego 10, Warsaw, 02-042, Poland.
Joanna KosińskaDepartment of Medical Genetics, Warsaw Medical University, Pawinskiego 3c, Warsaw, 02-106, Poland.
Henryk SkarżyńskiOto-Rhino-Laryngology Surgery Clinic, Institute of Physiology and Pathology of Hearing, Warsaw/Kajetany, Poland.
Monika OłdakDepartment of Genetics, Institute of Physiology and Pathology of Hearing, Mochnackiego 10, Warsaw, 02-042, Poland. m.oldak@ifps.org.pl.
Rafał PłoskiDepartment of Medical Genetics, Warsaw Medical University, Pawinskiego 3c, Warsaw, 02-106, Poland. rploski@wp.pl.
Institute of Physiology and Pathology of Hearing · PLMedical University of Warsaw · PL

Funding

NCN 2011/03/D/NZ5/05592
6 · The paper itself

Abstract

backgroundImplementation of whole exome sequencing has provided unique opportunity for a wide screening of causative variants in genetically heterogeneous diseases, including nonsyndromic hearing impairment. TRIOBP in the inner ear is responsible for proper structure and function of stereocilia and is necessary for sound transduction.

methodsWhole exome sequencing followed by Sanger sequencing was conducted on patients derived from Polish hearing loss family.

resultsBased on whole exome analysis, we identified two TRIOBP pathogenic variants (c.802_805delCAGG, p.Gln268Leufs*610 and c.5014G>T, p.Gly1672*, the first of which was novel) causative of nonsyndromic, peri- to postlingual, moderate-to-severe hearing loss in three siblings from a Polish family. Typically, TRIOBP pathogenic variants lead to prelingual, severe-to-profound hearing loss, thus the onset and degree of hearing impairment in our patients represent a distinct phenotypic manifestation caused by TRIOBP variants. The pathogenic variant p.Gln268Leufs*610 disrupts the TRIOBP-4 and TRIOBP-5 isoforms (both expressed exclusively in the inner ear and retina) whereas the second pathogenic variant c.514G>T, p.Gly1672* affects only TRIOBP-5.

conclusionsThe onset and degree of hearing impairment, characteristic for our patients, represent a unique phenotypic manifestation caused by TRIOBP pathogenic variants. Although TRIOBP alterations are not a frequent cause of hearing impairment, this gene should be thoroughly analyzed especially in patients with a postlingual hearing loss. A delayed onset of hearing impairment due to TRIOBP pathogenic variants creates a potential therapeutic window for future targeted therapies.

Indexed as

MutationAge of OnsetChildChild, PreschoolExomeExome SequencingFemaleHearing Loss, SensorineuralHumansMaleMicrofilament ProteinsPedigreePolandProtein IsoformsSequence Analysis, DNAMicrofilament ProteinsProtein IsoformsTRIOBP protein, humanHearing impairmentTRIOBPWhole exome sequencing

Identifiers

PMID29197352
PMCPMC5712175
OpenAlexW2772271326

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.