Evidence map›Paper›PMID 29196684›Full record

ArticleScientific reports2017

Squalene epoxidase plays a critical role in determining pig meat quality by regulating adipogenesis, myogenesis, and ROS scavengers.

Jeongim Ha, Seulgi Kwon, Jung Hye Hwang, Da Hye Park, Tae Wan Kim, Deok Gyeong Kang, Go Eun Yu, Hwa Chun Park, Sang Mi An, Chul Wook Kim

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Novel Insight into the Role of Squalene Epoxidase (International journal of molecular sciences · 2023
    Article
  5. Article
  6. Genome-Wide Association Study and FFrontiers in genetics · 2022
    Article
  7. Article
  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Jeongim HaSwine Science and Technology Center, Gyeongnam National University of Science & Technology, Jinju, South Korea.ORCID 0000-0002-4997-6982
Seulgi KwonSwine Science and Technology Center, Gyeongnam National University of Science & Technology, Jinju, South Korea.
Jung Hye HwangSwine Science and Technology Center, Gyeongnam National University of Science & Technology, Jinju, South Korea.
Da Hye ParkSwine Science and Technology Center, Gyeongnam National University of Science & Technology, Jinju, South Korea.
Tae Wan KimSwine Science and Technology Center, Gyeongnam National University of Science & Technology, Jinju, South Korea.
Deok Gyeong KangSwine Science and Technology Center, Gyeongnam National University of Science & Technology, Jinju, South Korea.
Go Eun YuSwine Science and Technology Center, Gyeongnam National University of Science & Technology, Jinju, South Korea.
Hwa Chun ParkDasan Pig Breeding Co., Namwon, South Korea.
Sang Mi AnSwine Science and Technology Center, Gyeongnam National University of Science & Technology, Jinju, South Korea.
Chul Wook KimSwine Science and Technology Center, Gyeongnam National University of Science & Technology, Jinju, South Korea. cwkim@gntech.ac.kr.
Gyeongnam National University of Science and Technology · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In mammals, Squalene epoxidase (SQLE) is an enzyme that converts squalene to 2,3-oxidosqualene, in the early stage of cholesterol generation. Here, we identified single nucleotide polymorphisms (SNPs) in the SQLE gene (c.2565 G > T) by RNA Sequencing from the liver tissue of Berkshire pigs. Furthermore, we found that homozygous GG pigs expressed more SQLE mRNA than GT heterozygous and TT homozygous pigs in longissimus dorsi tissue. Next, we showed that the SNP in the SQLE gene was associated with several meat quality traits including backfat thickness, carcass weight, meat colour (yellowness), fat composition, and water-holding capacity. Rates of myogenesis and adipogenesis induced in C2C12 cells and 3T3-L1 cells, respectively, were decreased by Sqle knockdown. Additionally, the expression of myogenic marker genes (Myog, Myod, and Myh4) and adipogenic marker genes (Pparg, Cebpa, and Adipoq) was substantially downregulated in cells transfected with Sqle siRNA. Moreover, mRNA expression levels of ROS scavengers, which affect meat quality by altering protein oxidation processes, were significantly downregulated by Sqle knockdown. Taken together, our results suggest the molecular mechanism by which SNPs in the SQLE gene can affect meat quality.

Indexed as

AdipogenesisMuscle DevelopmentPolymorphism, Single Nucleotide3T3-L1 CellsAnimalsBody WeightCell LineDown-RegulationGene Knockdown TechniquesGenotypeMeatMiceParaspinal MusclesQuantitative Trait LociRatsReactive Oxygen SpeciesReactive Oxygen SpeciesSqualene Monooxygenase

Identifiers

PMID29196684
PMCPMC5711910
OpenAlexW2769412524

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.