Evidence map›Paper›PMID 29196622›Full record

ArticleScientific reports2017

Intracellular biomass flocculation as a key mechanism of rapid bacterial killing by cationic, amphipathic antimicrobial peptides and peptoids.

Nathaniel P Chongsiriwatana, Jennifer S Lin, Rinki Kapoor, Modi Wetzler, Jennifer A C Rea, Maruti K Didwania, Christopher H Contag, Annelise E Barron

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
2.3field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 77 citations in OpenAlex.

  1. Review
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  6. Review
  7. Review
  8. Extended-Spectrum β-Lactamase-ProducingAntibiotics (Basel, Switzerland) · 2025
    Review
  9. Antiparasitic effect of peptoids againstMicrobiology (Reading, England) · 2025
    Article
  10. Synthetic host defense peptide inhibits SARS-CoV-2 replicationAntimicrobial agents and chemotherapy · 2025
    Article
  11. Structural Optimization of Antifungal Peptoids targetingACS medicinal chemistry letters · 2025
    Article
  12. Antimicrobial Peptide-Peptoid Macrocycles from the Polymyxin B2 Chemical Space.Angewandte Chemie (International ed. in English) · 2025
    Article
  13. Article
  14. Article
  15. Article
  16. Article
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  18. Article
  19. Review
  20. Peptides with Antimicrobial Activity in the Saliva of the Malaria VectorInternational journal of molecular sciences · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Nathaniel P ChongsiriwatanaDepartment of Chemical and Biological Engineering, Northwestern University, Evanston, Illinois, United States.
Jennifer S LinDepartment of Bioengineering, Stanford University, Stanford, California, United States.
Rinki KapoorBiophysics Program, Stanford University, Stanford, California, United States.
Modi WetzlerDepartment of Bioengineering, Stanford University, Stanford, California, United States.
Jennifer A C ReaDepartment of Chemical and Biological Engineering, Northwestern University, Evanston, Illinois, United States.
Maruti K DidwaniaDepartment of Bioengineering, Stanford University, Stanford, California, United States.
Christopher H ContagDepartments of Microbiology and Immunology, Pediatrics, and Radiology, Stanford University, Stanford, California, United States.ORCID 0000-0002-1011-8278
Annelise E BarronDepartment of Bioengineering, Stanford University, Stanford, California, United States. aebarron@stanford.edu.
Stanford University · USNorthwestern University · US

Funding

Development of a Biomimetic Lung Surfactant ReplacementR01HL067984 · NHLBI · STANFORD UNIVERSITY · PI BARRON, ANNELISE EMILY · 2001 to 2010
$2.5M
Ampetoids as Biostable Functional Mimics of Antimicrobial PeptidesR01AI072666 · NIAID · STANFORD UNIVERSITY · PI BARRON, ANNELISE EMILY · 2007 to 2011
$1.8M
NHLBI NIH HHS R01 HL067984NIAID NIH HHS R01 AI072666
6 · The paper itself

Abstract

Many organisms rely on antimicrobial peptides (AMPs) as a first line of defense against pathogens. In general, most AMPs are thought to kill bacteria by binding to and disrupting cell membranes. However, certain AMPs instead appear to inhibit biomacromolecule synthesis, while causing less membrane damage. Despite an unclear understanding of mechanism(s), there is considerable interest in mimicking AMPs with stable, synthetic molecules. Antimicrobial N-substituted glycine (peptoid) oligomers ("ampetoids") are structural, functional and mechanistic analogs of helical, cationic AMPs, which offer broad-spectrum antibacterial activity and better therapeutic potential than peptides. Here, we show through quantitative studies of membrane permeabilization, electron microscopy, and soft X-ray tomography that both AMPs and ampetoids trigger extensive and rapid non-specific aggregation of intracellular biomacromolecules that correlates with microbial death. We present data demonstrating that ampetoids are "fast killers", which rapidly aggregate bacterial ribosomes in vitro and in vivo. We suggest intracellular biomass flocculation is a key mechanism of killing for cationic, amphipathic AMPs, which may explain why most AMPs require micromolar concentrations for activity, show significant selectivity for killing bacteria over mammalian cells, and finally, why development of resistance to AMPs is less prevalent than developed resistance to conventional antibiotics.

Indexed as

Amino Acid SequenceAnti-Infective AgentsAntimicrobial Cationic PeptidesBacteriaBiomassHemolysisHumansKineticsLipid BilayersMicroscopy, Electron, ScanningPeptoidsPermeabilityRibosomesAnti-Infective AgentsAntimicrobial Cationic PeptidesLipid BilayersPeptoids

Identifiers

PMID29196622
PMCPMC5711933
OpenAlexW2769111494

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.