Evidence map›Paper›PMID 29196210›Full record

ArticleJournal of virological methods2018

Quantification of M13 and T7 bacteriophages by TaqMan and SYBR green qPCR.

Xiujuan Peng, Alex Nguyen, Debadyuti Ghosh

Abstract read
In one paragraph

Article in Journal of virological methods, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 52 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Characterization of selected phages for biocontrol of food-spoilage pseudomonads.International microbiology : the official journal of the Spanish Society for Microbiology · 2024
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. An InducibleViruses · 2022
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Xiujuan PengDivision of Molecular Pharmaceutics and Drug Delivery, College of Pharmacy.
Alex NguyenCollege of Natural Science, University of Texas, Austin, United States.
Debadyuti GhoshDivision of Molecular Pharmaceutics and Drug Delivery, College of Pharmacy. Electronic address: dghosh@austin.utexas.edu.
American Pharmacists Association · USThe University of Texas at Austin · US

Funding

Virus-inspired nanoparticles for mucus penetrating gene deliveryR01HL138251 · NHLBI · UNIVERSITY OF TEXAS AT AUSTIN · PI GHOSH, DEBADYUTI, SMYTH, HUGH DAVID · 2017 to 2020
$1.6M
NHLBI NIH HHS R01 HL138251
6 · The paper itself

Abstract

TaqMan and SYBR Green quantitative PCR (qPCR) methods were developed as DNA-based approaches to reproducibly enumerate M13 and T7 phages from phage display selection experiments individually and simultaneously. The genome copies of M13 and T7 phages were quantified by TaqMan or SYBR Green qPCR referenced against M13 and T7 DNA standard curves of known concentrations. TaqMan qPCR was capable of quantifying M13 and T7 phage DNA simultaneously with a detection range of 2.75*10

Indexed as

Organic ChemicalsBacteriophage M13Bacteriophage T7BenzothiazolesDiaminesQuinolinesReagent Kits, DiagnosticReal-Time Polymerase Chain ReactionReproducibility of ResultsSensitivity and SpecificityBenzothiazolesDiaminesOrganic ChemicalsQuinolinesReagent Kits, DiagnosticSYBR Green IBacteriophageM13Plaque assayqPCRSYBR-greenT7TaqMan

Identifiers

PMID29196210
PMCPMC5745055
OpenAlexW2774544658

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.