Evidence map›Paper›PMID 29194435›Full record

ArticlePloS one2017

Adiposity QTL Adip20 decomposes into at least four loci when dissected using congenic strains.

Cailu Lin, Brad D Fesi, Michael Marquis, Natalia P Bosak, Anna Lysenko, Mohammed Amin Koshnevisan, Fujiko F Duke, Maria L Theodorides, Theodore M Nelson, Amanda H McDaniel and 5 more

Abstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Genetic controls of Tas1r3-independent sucrose consumption in mice.Mammalian genome : official journal of the International Mammalian Genome Society · 2021
    Article
  2. Burly1 is a mouse QTL for lean body mass that maps to a 0.8-Mb region of chromosome 2.Mammalian genome : official journal of the International Mammalian Genome Society · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Cailu LinMonell Chemical Senses Center, Philadelphia, Pennsylvania, United States of America.
Brad D FesiMonell Chemical Senses Center, Philadelphia, Pennsylvania, United States of America.
Michael MarquisMonell Chemical Senses Center, Philadelphia, Pennsylvania, United States of America.
Natalia P BosakMonell Chemical Senses Center, Philadelphia, Pennsylvania, United States of America.
Anna LysenkoMonell Chemical Senses Center, Philadelphia, Pennsylvania, United States of America.
Mohammed Amin KoshnevisanMonell Chemical Senses Center, Philadelphia, Pennsylvania, United States of America.
Fujiko F DukeMonell Chemical Senses Center, Philadelphia, Pennsylvania, United States of America.
Maria L TheodoridesMonell Chemical Senses Center, Philadelphia, Pennsylvania, United States of America.
Theodore M NelsonMonell Chemical Senses Center, Philadelphia, Pennsylvania, United States of America.
Amanda H McDanielMonell Chemical Senses Center, Philadelphia, Pennsylvania, United States of America.
Mauricio AvigdorMonell Chemical Senses Center, Philadelphia, Pennsylvania, United States of America.
Charles J ArayataMonell Chemical Senses Center, Philadelphia, Pennsylvania, United States of America.
Lauren ShawMonell Chemical Senses Center, Philadelphia, Pennsylvania, United States of America.
Alexander A BachmanovMonell Chemical Senses Center, Philadelphia, Pennsylvania, United States of America.
Danielle R ReedMonell Chemical Senses Center, Philadelphia, Pennsylvania, United States of America.ORCID http://orcid.org/0000-0002-4374-6107

Funding

MAPPING GENES FOR BODY WEIGHT AND FATNESS IN MICER01DK058797 · NIDDK · MONELL CHEMICAL SENSES CENTER · PI REED, DANIELLE RENEE · 2000 to 2013
$3.4M
Molecular BiologyP30DC011735 · NIDCD · MONELL CHEMICAL SENSES CENTER · PI BACHMANOV, ALEXANDER A · 2011 to 2015
$2.5M
Fine mapping of mouse chr 2 for body composition genesR01DK094759 · NIDDK · MONELL CHEMICAL SENSES CENTER · PI REED, DANIELLE RENEE · 2011 to 2014
$1.2M
Improvement to the Animal Facility HVAC System at the Monell Chemical Senses CenterG20OD020296 · OD · MONELL CHEMICAL SENSES CENTER · PI REED, DANIELLE RENEE · 2015 to 2015
$498k
LabMaster: food and water intake, activity and metabolic rateS10RR025607 · NCRR · MONELL CHEMICAL SENSES CENTER · PI REED, DANIELLE RENEE · 2009 to 2009
$267k
Targeted genotyping and gene expression with the QuantStudio 12K FlexS10OD018125 · OD · MONELL CHEMICAL SENSES CENTER · PI REED, DANIELLE RENEE · 2015 to 2015
$185k
Measurement of body composition in rats and miceS10RR026752 · NCRR · MONELL CHEMICAL SENSES CENTER · PI REED, DANIELLE RENEE · 2011 to 2011
$176k
NCRR NIH HHS S10 RR025607NCRR NIH HHS S10 RR026752NIDCD NIH HHS P30 DC011735NIDDK NIH HHS R01 DK058797NIDDK NIH HHS R01 DK094759NIH HHS G20 OD020296NIH HHS S10 OD018125
6 · The paper itself

Abstract

An average mouse in midlife weighs between 25 and 30 g, with about a gram of tissue in the largest adipose depot (gonadal), and the weight of this depot differs between inbred strains. Specifically, C57BL/6ByJ mice have heavier gonadal depots on average than do 129P3/J mice. To understand the genetic contributions to this trait, we mapped several quantitative trait loci (QTLs) for gonadal depot weight in an F2 intercross population. Our goal here was to fine-map one of these QTLs, Adip20 (formerly Adip5), on mouse chromosome 9. To that end, we analyzed the weight of the gonadal adipose depot from newly created congenic strains. Results from the sequential comparison method indicated at least four rather than one QTL; two of the QTLs were less than 0.5 Mb apart, with opposing directions of allelic effect. Different types of evidence (missense and regulatory genetic variation, human adiposity/body mass index orthologues, and differential gene expression) implicated numerous candidate genes from the four QTL regions. These results highlight the value of mouse congenic strains and the value of this sequential method to dissect challenging genetic architecture.

Indexed as

Quantitative Trait LociAdiposityAnimalsFemaleGenetic VariationMaleMice

Identifiers

PMID29194435
PMCPMC5711020

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.