Evidence map›Paper›PMID 29190767›Full record

ArticlePloS one2017

High DNA stability in white blood cells and buffy coat lysates stored at ambient temperature under anoxic and anhydrous atmosphere.

Anne-Lise Fabre, Aurélie Luis, Marthe Colotte, Sophie Tuffet, Jacques Bonnet

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 17 citations in OpenAlex.

  1. Observational
  2. Article
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  4. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Anne-Lise FabreImagene, R&D department, Université de Bordeaux, ENSTBB, 146 Rue Léo Saignat, Bordeaux, France.ORCID http://orcid.org/0000-0003-4871-0637
Aurélie LuisImagene, R&D department, Université de Bordeaux, ENSTBB, 146 Rue Léo Saignat, Bordeaux, France.
Marthe ColotteImagene, production platform, Rue Henri Desbruères, Genopole campus 1, Bât 6, Evry, France.
Sophie TuffetImagene, R&D department, Université de Bordeaux, ENSTBB, 146 Rue Léo Saignat, Bordeaux, France.
Jacques BonnetImagene, R&D department, Université de Bordeaux, ENSTBB, 146 Rue Léo Saignat, Bordeaux, France.
Université de Bordeaux · FRGenopole (France) · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Conventional storage of blood-derived fractions relies on cold. However, lately, ambient temperature preservation has been evaluated by several independent institutions that see economic and logistic advantages in getting rid of the cold chain. Here we validated a novel procedure for ambient temperature preservation of DNA in white blood cell and buffy coat lysates based on the confinement of the desiccated biospecimens under anoxic and anhydrous atmosphere in original hermetic minicapsules. For this validation we stored encapsulated samples either at ambient temperature or at several elevated temperatures to accelerate aging. We found that DNA extracted from stored samples was of good quality with a yield of extraction as expected. Degradation rates were estimated from the average fragment size of denatured DNA run on agarose gels and from qPCR reactions. At ambient temperature, these rates were too low to be measured but the degradation rate dependence on temperature followed Arrhenius' law, making it possible to extrapolate degradation rates at 25°C. According to these values, the DNA stored in the encapsulated blood products would remain larger than 20 kb after one century at ambient temperature. At last, qPCR experiments demonstrated the compatibility of extracted DNA with routine DNA downstream analyses. Altogether, these results showed that this novel storage method provides an adequate environment for ambient temperature long term storage of high molecular weight DNA in dehydrated lysates of white blood cells and buffy coats.

Indexed as

TemperatureDNAElectrophoresis, Agar GelHumansLeukocytesOxygenReal-Time Polymerase Chain ReactionDNAOxygen

Identifiers

PMID29190767
PMCPMC5708797
OpenAlexW2771952097

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.