Evidence map›Paper›PMID 29187243›Full record

ArticleBMC research notes2017

Doxycycline induces dysbiosis in female C57BL/6NCrl mice.

Felicia D Duke Boynton, Aaron C Ericsson, Mayu Uchihashi, Misha L Dunbar, J Erby Wilkinson

Open access · goldAbstract read
In one paragraph

Article in BMC research notes, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 42 citations in OpenAlex.

  1. Association of Antibiotic Use and New-Onset ICD Coding of Geographic Atrophy.Investigative ophthalmology & visual science · 2026
    Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Intestinal Epithelial Regeneration in Response to Ionizing Irradiation.Journal of visualized experiments : JoVE · 2022
    Article
  15. Article
  16. Effect of Doxycycline in Decreasing the Severity ofAntibiotics (Basel, Switzerland) · 2022
    Article
  17. Article
  18. Article
  19. The gut microbiome of laboratory mice: considerations and best practices for translational research.Mammalian genome : official journal of the International Mammalian Genome Society · 2021
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 2 countries.

Felicia D Duke BoyntonUnit for Laboratory Animal Medicine, University of Michigan Medical School, Ann Arbor, MI, USA. fduke@umn.edu.
Aaron C EricssonUniversity of Missouri Metagenomics Research Center, University of Missouri, Columbia, MO, USA.
Mayu UchihashiUnit for Laboratory Animal Medicine, University of Michigan Medical School, Ann Arbor, MI, USA.
Misha L DunbarUnit for Laboratory Animal Medicine, University of Michigan Medical School, Ann Arbor, MI, USA.
J Erby WilkinsonUnit for Laboratory Animal Medicine, University of Michigan Medical School, Ann Arbor, MI, USA.
University of Michigan–Ann Arbor · USMedtronic (Ireland) · IEUniversity of Minnesota · USUniversity of Missouri · US

Funding

The Mutant Mouse Resource and Research Center at the University of Missouri - ResourceU42OD010918 · OD · UNIVERSITY OF MISSOURI-COLUMBIA · PI Bret Daniel Ulery · 2012 to 2026
$25.1M
Impact of gut microbiota and segmented filamentous bacteria on colitis-associated colorectal cancerK01OD019924 · OD · UNIVERSITY OF MISSOURI-COLUMBIA · PI ERICSSON, AARON · 2016 to 2020
$573k
NIH HHS K01 OD019924NIH HHS U42 OD010918
6 · The paper itself

Abstract

objectiveThis study aims to demonstrate the effect of oral doxycycline on fecal microbiota of mice. Doxycycline is a common effector for control of gene expression using the tet-inducible system in transgenic mice. The effect of oral doxycycline on murine gut microbiota has not been reported. We evaluated the effect of doxycycline treatment by sequencing the V4 hypervariable region of the 16S rRNA gene from fecal samples collected during a 4 week course of treatment at a dose of 2 mg/ml in the drinking water.

resultsThe fecal microbiota of treated animals were distinct from control animals; the decreased richness and diversity were characterized primarily by Bacteroides sp. enrichment. These effects persisted when the treatment was temporarily discontinued for 1 week. These data suggest that doxycycline treatment can induce significant dysbiosis, and its effects should be considered when used in animal models that are or maybe sensitive to perturbation of the gut microbiota.

Indexed as

AnimalsAnti-Bacterial AgentsDisease Models, AnimalDoxycyclineDysbiosisFecesFemaleGastrointestinal MicrobiomeMiceMice, Inbred C57BLRNA, Ribosomal, 16SAnti-Bacterial AgentsDoxycyclineRNA, Ribosomal, 16SAnimal modelDoxycyclineMicrobiomeMicrobiotaMouseTet-offTet-on

Identifiers

PMID29187243
PMCPMC5708113
OpenAlexW2769523957

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.