Evidence map›Paper›PMID 29187147›Full record

ArticleBMC plant biology2017

Genome-wide analysis of miRNAs in Carya cathayensis.

Zhi-Chao Sun, Liang-Sheng Zhang, Zheng-Jia Wang

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.0field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. MicroRNAs in Woody Plants.Frontiers in plant science · 2021
    Review
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Zhi-Chao SunState Key Laboratory of Subtropical Silviculture, School of Forestry and Biotechnology, Zhejiang Agriculture and Forestry University, Hangzhou, 311300, China.
Liang-Sheng ZhangState Key Laboratory of Subtropical Silviculture, School of Forestry and Biotechnology, Zhejiang Agriculture and Forestry University, Hangzhou, 311300, China. fafuzhang@163.com.
Zheng-Jia WangState Key Laboratory of Subtropical Silviculture, School of Forestry and Biotechnology, Zhejiang Agriculture and Forestry University, Hangzhou, 311300, China. wzhj21@163.com.
Zhejiang A & F University · CN

Funding

Training Program in Stem Cell and Cancer BiologyT32CA160002 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI LEHMANN, RUTH · 2011 to 2015
$1.6M
National High-Tech Research and Development Program of China 2013AA102605National Natural Science Foundation of China 31170637Zhejiang Provincial Natural Science Foundation for Distinguished Young Scholars LR14C160002
6 · The paper itself

Abstract

backgroundMicroRNA (miRNA) plays an important role in plant development regulation. Hickory is an economically important plant in which the amount of flowering determines its production.

resultsHere, 51 conserved miRNAs, which belong to 16 families and 195 novel miRNAs were identified in hickory genome. For each conserved miRNA family, we used sequences from hickory and other plants to construct a phylogenetic tree, which shows that each family has members in hickory. Some of the conserved miRNA families (i.e., miR167 and miR397) have more members in hickory than in other plants because of gene expansion. MiR166 exhibited tandem duplication with three copies being observed. Many members of these conserved miRNA families were detected in hickory flowers, and the expression patterns of target genes were opposite to those of the related miRNAs, indicating that miRNAs may have important functions in floral regulation of hickory.

conclusionsTaken together, a comprehensive analysis was conducted to identify miRNAs produced in hickory flower organs, demonstrating functional conservation and diversity of miRNA families among hickory, Arabidopsis, grape, and poplar.

Indexed as

MicroRNAsRNA, PlantCaryaEvolution, MolecularGenes, PlantPhylogenyTranscriptomeMicroRNAsRNA, PlantFemale flowerHickorymiRNAPhylogeneticQuantitative real-time PCR

Identifiers

PMID29187147
PMCPMC5708078
OpenAlexW2769263492

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.