Evidence map›Paper›PMID 29186575›Full record

ArticleNucleic acids research2018

DNA as UV light-harvesting antenna.

Ivan L Volkov, Zakhar V Reveguk, Pavel Yu Serdobintsev, Ruslan R Ramazanov, Alexei I Kononov

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 42 citations in OpenAlex.

  1. Review
  2. Review
  3. Nonradiative Deactivation of the Fluorescent AgThe journal of physical chemistry letters · 2024
    Article
  4. Article
  5. Excited-State Dynamics in a DNA-Stabilized AgThe journal of physical chemistry letters · 2023
    Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Ivan L VolkovSt. Petersburg State University, St. Petersburg 199034, Russia.
Zakhar V RevegukSt. Petersburg State University, St. Petersburg 199034, Russia.
Pavel Yu SerdobintsevSt. Petersburg State University, St. Petersburg 199034, Russia.
Ruslan R RamazanovSt. Petersburg State University, St. Petersburg 199034, Russia.
Alexei I KononovSt. Petersburg State University, St. Petersburg 199034, Russia.
St Petersburg University · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The ordered structure of UV chromophores in DNA resembles photosynthetic light-harvesting complexes in which quantum coherence effects play a major role in highly efficient directional energy transfer. The possible role of coherent excitons in energy transport in DNA remains debated. Meanwhile, energy transport properties are greatly important for understanding the mechanisms of photochemical reactions in cellular DNA and for DNA-based artificial nanostructures. Here, we studied energy transfer in DNA complexes formed with silver nanoclusters and with intercalating dye (acridine orange). Steady-state fluorescence measurements with two DNA templates (15-mer DNA duplex and calf thymus DNA) showed that excitation energy can be transferred to the clusters from 21 and 28 nucleobases, respectively. This differed from the DNA-acridine orange complex for which energy transfer took place from four neighboring bases only. Fluorescence up-conversion measurements showed that the energy transfer took place within 100 fs. The efficient energy transport in the Ag-DNA complexes suggests an excitonic mechanism for the transfer, such that the excitation is delocalized over at least four and seven stacked bases, respectively, in one strand of the duplexes stabilizing the clusters. This result demonstrates that the exciton delocalization length in some DNA structures may not be limited to just two bases.

Indexed as

Acridine OrangeAnimalsCattleDNAEnergy TransferFluorescenceNanostructuresNucleic Acid ConformationPhotosynthesisQuantum TheorySilverUltraviolet RaysAcridine Orangecalf thymus DNADNASilver

Identifiers

PMID29186575
PMCPMC6283424
OpenAlexW2770642556

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.