ArticleDNA research : an international journal for rapid publication of reports on genes and genomes2018
Development of a high-density linkage map and chromosome segment substitution lines for Japanese soybean cultivar Enrei.
Article in DNA research : an international journal for rapid publication of reports on genes and genomes, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.
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Who cites it
15 citing papers in PubMed.
- Loss-of-function allele of the soybean flowering/maturation gene TOF11 increases free amino acid content at the edamame stage and improves eating quality.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- The current state of Japanese soybean breeding using DNA marker technology.Breeding science · 2026Article
- Identification and field validation of QTLs for soybean red crown rot resistance from wild soybean accessions.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025Article
- The genomic landscape of gene-level structural variations in Japanese and global soybean Glycine max cultivars.Nature genetics · 2025Article
- Mapping QTLs Controlling Soybean Rust Disease Resistance in Chiang Mai 5, an Induced Mutant Cultivar.Genes · 2022Article
- QTL Mapping of Palmitic Acid Content Using Specific-Locus Amplified Fragment Sequencing (SLAF-Seq) Genotyping in Soybeans (International journal of molecular sciences · 2022Article
- Transgressive resistance to Heterodera glycines in chromosome segment substitution lines derived from susceptible soybean parents.The plant genome · 2021Article
- Mapping soybeanBreeding science · 2020Article
- Genetic dissection of an allotetraploid interspecific CSSLs guides interspecific genetics and breeding in cotton.BMC genomics · 2020Article
- Impacts of genomic research on soybean improvement in East Asia.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020Review
- Molecular Basis Underlying Common Cutworm Resistance of the Primitive Soybean Landrace Peking.Frontiers in genetics · 2020Article
- Highly multiplexed AmpliSeq technology identifies novel variation of flowering time-related genes in soybean (Glycine max).DNA research : an international journal for rapid publication of reports on genes and genomes · 2019Article
- Genetic Diversity in Stomatal Density among Soybeans Elucidated Using High-throughput Technique Based on an Algorithm for Object Detection.Scientific reports · 2019Article
- Development of Three Sets of High-Throughput Genotyped Rice Chromosome Segment Substitution Lines and QTL Mapping for Eleven Traits.Rice (New York, N.Y.) · 2019Article
- Accelerating Soybean Breeding in a CO2-Supplemented Growth Chamber.Plant & cell physiology · 2019Article
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Authors and funding
11 authors.
Funding
Abstract
Using progeny of a cross between Japanese soybean Enrei and Chinese soybean Peking, we developed a high-density linkage map and chromosomal segment substitution lines (CSSLs). The map consists of 2,177 markers with polymorphism information for 32 accessions and provides a detailed genetic framework for these markers. The marker order on the linkage map revealed close agreement with that on the chromosome-scale assembly, Wm82.a2.v1. The differences, especially on Chr. 5 and Chr. 11, in the present map provides information to identify regions in the genome assembly where additional information is required to resolve marker order and assign remaining scaffolds. To cover the entire soybean genome, we used 999 BC3F2 backcross plants and selected 103 CSSLs carrying chromosomal segments from Peking in the genetic background of Enrei. Using these low-genetic-complexity resources, we dissected variation in traits related to flowering, maturity and yield into approximately 50 reproducible quantitative trait loci (QTLs) and evaluated QTLs with small genetic effects as single genetic factors in a uniform genetic background. CSSLs developed in this study may be good starting material for removing the unfavourable characteristics of Peking during pre-breeding and for isolation of genes conferring disease and stress resistance that have not yet been characterized.
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