Evidence map›Paper›PMID 29186192›Full record

ArticlePloS one2017

Development of a GAL4-VP16/UAS trans-activation system for tissue specific expression in Medicago truncatula.

Amélie Sevin-Pujol, Mélanie Sicard, Charles Rosenberg, Marie-Christine Auriac, Agnès Lepage, Andreas Niebel, Clare Gough, Sandra Bensmihen

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Amélie Sevin-PujolLIPM, Université de Toulouse, INRA, CNRS, Castanet-Tolosan, France.
Mélanie SicardLIPM, Université de Toulouse, INRA, CNRS, Castanet-Tolosan, France.
Charles RosenbergLIPM, Université de Toulouse, INRA, CNRS, Castanet-Tolosan, France.
Marie-Christine AuriacLIPM, Université de Toulouse, INRA, CNRS, Castanet-Tolosan, France.
Agnès LepageLIPM, Université de Toulouse, INRA, CNRS, Castanet-Tolosan, France.
Andreas NiebelLIPM, Université de Toulouse, INRA, CNRS, Castanet-Tolosan, France.
Clare GoughLIPM, Université de Toulouse, INRA, CNRS, Castanet-Tolosan, France.
Sandra BensmihenLIPM, Université de Toulouse, INRA, CNRS, Castanet-Tolosan, France.ORCID http://orcid.org/0000-0003-1351-7220
Centre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Promoters with tissue-specific activity are very useful to address cell-autonomous and non cell autonomous functions of candidate genes. Although this strategy is widely used in Arabidopsis thaliana, its use to study tissue-specific regulation of root symbiotic interactions in legumes has only started recently. Moreover, using tissue specific promoter activity to drive a GAL4-VP16 chimeric transcription factor that can bind short upstream activation sequences (UAS) is an efficient way to target and enhance the expression of any gene of interest. Here, we developed a collection of promoters with different root cell layers specific activities in Medicago truncatula and tested their abilities to drive the expression of a chimeric GAL4-VP16 transcription factor in a trans-activation UAS: β-Glucuronidase (GUS) reporter gene system. By developing a binary vector devoted to modular Golden Gate cloning together with a collection of adapted tissue specific promoters and coding sequences we could test the activity of four of these promoters in trans-activation GAL4/UAS systems and compare them to "classical" promoter GUS fusions. Roots showing high levels of tissue specific expression of the GUS activity could be obtained with this trans-activation system. We therefore provide the legume community with new tools for efficient modular Golden Gate cloning, tissue specific expression and a trans-activation system. This study provides the ground work for future development of stable transgenic lines in Medicago truncatula.

Indexed as

Transcriptional ActivationCloning, MolecularGenes, PlantMedicago truncatulaPromoter Regions, GeneticTrans-ActivatorsGal-VP16Trans-Activators

Identifiers

PMID29186192
PMCPMC5706680
OpenAlexW2768295734

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.