Evidence map›Paper›PMID 29184208›Full record

ArticleNature neuroscience2017

Temporally precise single-cell-resolution optogenetics.

Or A Shemesh, Dimitrii Tanese, Valeria Zampini, Changyang Linghu, Kiryl Piatkevich, Emiliano Ronzitti, Eirini Papagiakoumou, Edward S Boyden, Valentina Emiliani

Erratum issuedAbstract read
In one paragraph

Article in Nature neuroscience, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 150 papers.

0numbers the graph read from it
0cells of the map it votes in
150citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

150 citing papers in PubMed.

  1. Article
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  6. The Importance of Synchrony in the Neural Control of Movement.bioRxiv : the preprint server for biology · 2026
    Article
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  12. Review
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  20. Exact linear theory of perturbation response in a space- and feature-dependent cortical circuit model.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article

90 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors.

Or A ShemeshMedia Laboratory, Massachusetts Institute of Technology (MIT), Cambridge, MA, USA.
Dimitrii TaneseNeurophotonics Laboratory, Wave Front Engineering Microscopy Group, CNRS UMR8250, Université Paris Descartes, Paris, France.
Valeria ZampiniNeurophotonics Laboratory, Wave Front Engineering Microscopy Group, CNRS UMR8250, Université Paris Descartes, Paris, France.
Changyang LinghuMedia Laboratory, Massachusetts Institute of Technology (MIT), Cambridge, MA, USA.
Kiryl PiatkevichMedia Laboratory, Massachusetts Institute of Technology (MIT), Cambridge, MA, USA.
Emiliano RonzittiNeurophotonics Laboratory, Wave Front Engineering Microscopy Group, CNRS UMR8250, Université Paris Descartes, Paris, France.
Eirini PapagiakoumouNeurophotonics Laboratory, Wave Front Engineering Microscopy Group, CNRS UMR8250, Université Paris Descartes, Paris, France.ORCID http://orcid.org/0000-0002-7333-8796
Edward S BoydenMedia Laboratory, Massachusetts Institute of Technology (MIT), Cambridge, MA, USA. esb@media.mit.edu.ORCID http://orcid.org/0000-0002-0419-3351
Valentina EmilianiNeurophotonics Laboratory, Wave Front Engineering Microscopy Group, CNRS UMR8250, Université Paris Descartes, Paris, France. valentina.emiliani@parisdescartes.fr.ORCID http://orcid.org/0000-0003-2992-9510

Funding

Recording neural activities onto DNAR01MH103910 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI BOYDEN, EDWARD S., CHURCH, GEORGE M · 2013 to 2017
$9.5M
Novel Platforms for Systematic Optical Control of Complex Neural Circuits In VivoR01DA029639 · NIDA · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI BOYDEN, EDWARD S. · 2010 to 2023
$6.7M
Redesigning General Anesthesia (Admin Supp)R01GM104948 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI BOYDEN, EDWARD S., BROWN, EMERY N · 2012 to 2016
$4.4M
Millisecond-Timescale Whole-Brain Neural Activity Mapping in Health and DiseaseDP1NS087724 · NINDS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI BOYDEN, EDWARD S. · 2013 to 2017
$3.9M
Vascular Interfaces for Brain Imaging and StimulationR24MH106075 · NIMH · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI DESIMONE, ROBERT · 2014 to 2016
$1.4M
Causal Analysis of Electrically Connected Neural NetworksR01NS087950 · NINDS · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI HAN, XUE · 2013 to 2016
$1.3M
A next-generation spatial light modulator for mapping of neural networksR44EB021054 · NIBIB · BOULDER NONLINEAR SYSTEMS, INC. · PI HOY, CHRISTOPHER LUK · 2016 to 2017
$993k
Three Dimensional Holography for Parallel Multi-target Optogenetic Circuit ManipulationU01NS090501 · NINDS · PIERRE AND MARIE CURIE UNIVERSITY · PI EMILIANI, VALENTINA, MARRE, OLIVIER · 2014 to 2016
$941k
NIBIB NIH HHS R44 EB021054NIDA NIH HHS R01 DA029639NIGMS NIH HHS R01 GM104948NIMH NIH HHS R01 MH103910NIMH NIH HHS R24 MH106075NINDS NIH HHS DP1 NS087724NINDS NIH HHS R01 NS087950NINDS NIH HHS U01 NS090501
6 · The paper itself

Abstract

Optogenetic control of individual neurons with high temporal precision within intact mammalian brain circuitry would enable powerful explorations of how neural circuits operate. Two-photon computer-generated holography enables precise sculpting of light and could in principle enable simultaneous illumination of many neurons in a network, with the requisite temporal precision to simulate accurate neural codes. We designed a high-efficacy soma-targeted opsin, finding that fusing the N-terminal 150 residues of kainate receptor subunit 2 (KA2) to the recently discovered high-photocurrent channelrhodopsin CoChR restricted expression of this opsin primarily to the cell body of mammalian cortical neurons. In combination with two-photon holographic stimulation, we found that this somatic CoChR (soCoChR) enabled photostimulation of individual cells in mouse cortical brain slices with single-cell resolution and <1-ms temporal precision. We used soCoChR to perform connectivity mapping on intact cortical circuits.

Indexed as

AnimalsCerebral CortexGluK2 Kainate ReceptorImaging, Three-DimensionalKainic Acid ReceptorsMiceNerve NetNeuroimagingNeuronsOpsinsOptogeneticsPatch-Clamp TechniquesPhotic StimulationVisual CortexGluK2 Kainate ReceptorKainic Acid ReceptorsOpsins

Identifiers

PMID29184208
PMCPMC5726564

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.