Evidence map›Paper›PMID 29184079›Full record

ArticleScientific reports2017

Virus-host protein-protein interactions of mycobacteriophage Giles.

Jitender Mehla, Rebekah M Dedrick, J Harry Caufield, Jeroen Wagemans, Neha Sakhawalkar, Allison Johnson, Graham F Hatfull, Peter Uetz

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.3field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Phage KViruses · 2022
    Article
  5. Article
  6. Unraveling Protein Interactions between the Temperate Virus Bam35 and ItsInternational journal of molecular sciences · 2021
    Article
  7. Article
  8. Article
  9. Article
  10. Mycobacteriophages.Microbiology spectrum · 2018
    Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Jitender MehlaCenter for the Study of Biological Complexity, Virginia Commonwealth University, Richmond, VA, 23284, USA. jitender@vcu.edu.
Rebekah M DedrickDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania, 15260, USA.
J Harry CaufieldCenter for the Study of Biological Complexity, Virginia Commonwealth University, Richmond, VA, 23284, USA.
Jeroen WagemansLaboratory of Gene Technology, KU Leuven, Kasteelpark Arenberg 21 - Box 2462, 3001, Leuven, Belgium.
Neha SakhawalkarCenter for the Study of Biological Complexity, Virginia Commonwealth University, Richmond, VA, 23284, USA.
Allison JohnsonCenter for the Study of Biological Complexity, Virginia Commonwealth University, Richmond, VA, 23284, USA.
Graham F HatfullDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania, 15260, USA.ORCID 0000-0002-6705-6821
Peter UetzCenter for the Study of Biological Complexity, Virginia Commonwealth University, Richmond, VA, 23284, USA. uetz@vcu.edu.ORCID 0000-0001-6194-4927
Virginia Commonwealth University · USUniversity of Pittsburgh · USKU Leuven · BE

Funding

Integrative functional mapping of the Escherichia coli membrane interactomeR01GM109895 · NIGMS · VIRGINIA COMMONWEALTH UNIVERSITY · PI SAIER, MILTON H., UETZ, PETER HANS · 2014 to 2017
$1.1M
NIGMS NIH HHS R01 GM109895
6 · The paper itself

Abstract

Mycobacteriophage are viruses that infect mycobacteria. More than 1,400 mycobacteriophage genomes have been sequenced, coding for over one hundred thousand proteins of unknown functions. Here we investigate mycobacteriophage Giles-host protein-protein interactions (PPIs) using yeast two-hybrid screening (Y2H). A total of 25 reproducible PPIs were found for a selected set of 10 Giles proteins, including a putative virion assembly protein (gp17), the phage integrase (gp29), the endolysin (gp31), the phage repressor (gp47), and six proteins of unknown function (gp34, gp35, gp54, gp56, gp64, and gp65). We note that overexpression of the proteins is toxic to M. smegmatis, although whether this toxicity and the associated changes in cellular morphology are related to the putative interactions revealed in the Y2H screen is unclear.

Indexed as

Host-Pathogen InteractionsProtein Interaction MappingBacterial ProteinsGene Expression Regulation, ViralMycobacteriophagesMycobacteriumPhenotypeProtein Interaction MapsTwo-Hybrid System TechniquesViral ProteinsBacterial ProteinsViral Proteins

Identifiers

PMID29184079
PMCPMC5705681
OpenAlexW2770507702

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.