Evidence map›Paper›PMID 29184027›Full record

ArticlePlant physiology2018

Vacuolar Trafficking Protein VPS38 Is Dispensable for Autophagy.

Han Nim Lee, Xavier Zarza, Jeong Hun Kim, Min Ji Yoon, Sang-Hoon Kim, Jae-Hoon Lee, Nadine Paris, Teun Munnik, Marisa S Otegui, Taijoon Chung

Abstract read
In one paragraph

Article in Plant physiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Review
  5. Review
  6. Article
  7. Review
  8. Regulation of PIN-FORMED Protein Degradation.International journal of molecular sciences · 2023
    Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Autophagy in Plant Abiotic Stress Management.International journal of molecular sciences · 2021
    Review
  14. Article
  15. Article
  16. Review
  17. How autophagy is tied to inflammation and cancer.Molecular & cellular oncology · 2020
    Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Han Nim LeeDepartment of Biological Sciences, Pusan National University, Busan 46241, Korea.
Xavier ZarzaSwammerdam Institute for Life Sciences, Section Plant Cell Biology, University of Amsterdam, 1098 XH Amsterdam, The Netherlands.ORCID 0000-0001-8187-409X
Jeong Hun KimDepartment of Biological Sciences, Pusan National University, Busan 46241, Korea.
Min Ji YoonDepartment of Biological Sciences, Pusan National University, Busan 46241, Korea.
Sang-Hoon KimDepartment of Biology Education, Pusan National University, Busan 46241, Korea.
Jae-Hoon LeeDepartment of Biology Education, Pusan National University, Busan 46241, Korea.ORCID 0000-0003-1287-7267
Nadine ParisBiochimie et Physiologie Moléculaire des Plantes, Institute Biologie Intégrative des Plantes, UMR 5004 CNRS/UMR 0386 INRA/Montpellier SupAgro/Université Montpellier 2, F-34060 Montpellier Cedex 1, France.
Teun MunnikSwammerdam Institute for Life Sciences, Section Plant Cell Biology, University of Amsterdam, 1098 XH Amsterdam, The Netherlands.ORCID 0000-0002-4919-4913
Marisa S OteguiLaboratory of Cell and Molecular Biology and Department of Botany, University of Wisconsin-Madison, Madison, Wisconsin 53706.ORCID 0000-0003-4699-6950
Taijoon ChungDepartment of Biological Sciences, Pusan National University, Busan 46241, Korea taijoon@pusan.ac.kr.ORCID 0000-0002-5318-9105

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phosphatidylinositol 3-P (PI3P) is a signaling molecule that controls a variety of processes in endosomal, autophagic, and vacuolar/lysosomal trafficking in yeasts and mammals. Vacuolar protein sorting 34 (Vps34) is a conserved PI3K present in multiple complexes with specific functions and regulation. In yeast, the PI3K complex II consists of Vps34p, Vps15p, Vps30p/Atg6p, and Vps38p, and is essential for vacuolar protein sorting. Here, we describe the Arabidopsis (

Indexed as

AutophagyArabidopsisArabidopsis ProteinsBeclin-1EndosomesMutationProtein TransportSaccharomyces cerevisiaeVacuolesVesicular Transport ProteinsArabidopsis ProteinsBeclin-1Vesicular Transport ProteinsVPS38 protein, Arabidopsis

Identifiers

PMID29184027
PMCPMC5813560

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.