Evidence map›Paper›PMID 29182530›Full record

ArticleInternational journal of molecular sciences2017

Nodule-Enriched GRETCHEN HAGEN 3 Enzymes Have Distinct Substrate Specificities and Are Important for Proper Soybean Nodule Development.

Suresh Damodaran, Corey S Westfall, Brian A Kisely, Joseph M Jez, Senthil Subramanian

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.5field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. The Roles of Auxin Biosynthesis YUCCA Gene Family in Plants.International journal of molecular sciences · 2019
    Review
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Suresh DamodaranDepartment of Agronomy, Horticulture and Plant Science, South Dakota State University, Brookings, SD 57007, USA. suresh.damodaran@sdstate.edu.
Corey S WestfallDepartment of Biology, Washington University in St. Louis, St. Louis, MO 63130, USA. cswestfa@wustl.edu.
Brian A KiselyDepartment of Agronomy, Horticulture and Plant Science, South Dakota State University, Brookings, SD 57007, USA. brian.kisely@ndsu.edu.
Joseph M JezDepartment of Biology, Washington University in St. Louis, St. Louis, MO 63130, USA. jjez@wustl.edu.
Senthil SubramanianDepartment of Agronomy, Horticulture and Plant Science, South Dakota State University, Brookings, SD 57007, USA. senthil.subramanian@sdstate.edu.ORCID 0000-0002-7403-1139
South Dakota State University · USWashington University in St. Louis · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Legume root nodules develop as a result of a symbiotic relationship between the plant and nitrogen-fixing rhizobia bacteria in soil. Auxin activity is detected in different cell types at different stages of nodule development; as well as an enhanced sensitivity to auxin inhibits, which could affect nodule development. While some transport and signaling mechanisms that achieve precise spatiotemporal auxin output are known, the role of auxin metabolism during nodule development is unclear. Using a soybean root lateral organ transcriptome data set, we identified distinct nodule enrichment of three genes encoding auxin-deactivating GRETCHEN HAGEN 3 (GH3) indole-3-acetic acid (IAA) amido transferase enzymes:

Indexed as

Gene Expression Regulation, PlantGlycine maxIndoleacetic AcidsMicroRNAsPlant ProteinsPlant RootsRoot Nodules, PlantSubstrate Specificityindoleacetic acidIndoleacetic AcidsMicroRNAsPlant Proteinsartificial microRNAauxinGretchen Hagen 3 (GH3)indole-3-acetic acid (IAA)nodulesoybean (Glycine max)

Identifiers

PMID29182530
PMCPMC5751150
OpenAlexW2770554954

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.